Error: check digit format.
ST | |
---|---|
Origin | |
Sample | |
ESBL/Carbapenemase | |
Country | |
Strain |
No match with ST profile.
Error: check fasta format.
ANIm | K.variicola | K.quasivariicola | K.pneumoanie | K.quasipneumoniae |
---|---|---|---|---|
Query |
Allele | Profile | Identity (%) | Overlap (%) | Positions | Hit |
---|
Error: check dna format.
Allele | Profile | Identity (%) | Overlap (%) | Positions |
---|---|---|---|---|
Differences | ||||
Number | query () | database |
Database developed by the Centro de Investigación Sobre Enfermedades Infecciosas (CISEI)
in collaboration with the Centro de Ciencias Genómicas (CCG-UNAM). This site has been
funded by the Instituto Nacional de Salud Pública (INSP).
Reference for citations
of MLST of K. variicola:
Barrios-Camacho Humberto, Aguilar-Vera Alejandro,
Beltran-Rojel Marilu, Aguilar-Vera Edgar, Duran-Bedolla Josefina, Rodriguez-Medina Nadia,
Lozano Aguirre Luis, Perez-Carrascal Olga Maria, Rojas Jesús, and Garza-Ramos Ulises.
Molecular epidemiology of Klebsiella variicola obtained from different sources.
Scientific Reports. 2019. 9:10610.
Download
leuS | (Leucyl-tRNA synthethase) |
pgi | (Phosphoglucose iomerase) |
pgk | (Phosphoglycerate kinase) |
phoE | (Phosphoporine E) |
pyrG | (CTP synthase) |
rpoB | (β-subunit of RNA polymerase B) |
fusA | (Elongation factor G) |
Gene/primer | Sequence (5’-3’) | Annealing (Tm) | Size (bp) | Amplification Product (bp) |
---|---|---|---|---|
leuSKv-F | CGAACAGGTTATCGACGGCT | 63 °C | 594 | 968 |
leuSKv-R | CAAAGGTGTCGGTTTCACGC | |||
pgiKv-F | AAAGAGACCGATCTGGCAGG | 60 °C | 600 | 760 |
pgiKv-R | ACCAGATACCGATCAGCGCC | |||
pgkKv-F | TCGTGATGGATGCTTTCGGT | 63 °C | 594 | 444663 |
pgkKv-R | AGATTTTGTCAGCGATGCCG | |||
phoEKv-F | CTGTACGACGTGGAAGCCTG | 63 °C | 453 | 613 |
phoEKv-R | CCACGAAGGCGTTCATGTTT | |||
pyrGKv-F | CCGATCGCTATGGTCGCTG | 60 °C | 522 | 664 |
pyrGKv-R | CGGGACATCAGTTCCGGGT | |||
rpoBKv-F | GCCAGCTGTCCCAGTTTATG | 60 °C | 513 | 648 |
rpoBKv-R | GAACGGTACCGCCACGTTTA | |||
fusAKv-F | CGAAAACCAAAGCTGACCAGG | 62 °C | 561 | 782 |
fusAKv-R | CATGGTGTATGATGCACGACCT |
leuS (594 bp) |
GATCACTGGCCAGACACCGTAAAGACCATGCAGCGCAACTGGATCGGCCGTTCCGAAGGG GTGGAAATCTCCTTTGACGTCAACAACTACGCCGATAAGCTGACCGTCTACACCACCCGT CCGGACACCTTTATGGGCTGCACCTACCTGGCTGTCGCGGCGGGTCACCCGCTGGCGCAG CAGGCTGCAGCGAACAATCCGGCGCTGGCTGCCTTTATCGACGAATGCCGTAATACCAAA GTAGCCGAAGCCGACATGGCGACGATGGAGAAAAAAGGCGTCGATACCGGGTTTAAAGCC ATTCACCCGCTGACCGGCGAAGAAATTCCTGTCTGGGCGGCAAACTTCGTGCTGATGGAA TATGGCACCGGCGCGGTCATGGCCGTTCCGGGTCACGACCAGCGTGACTATGAGTTCGCC AGCAAGTACGGTCTGAACATCAAGCCGGTTATCCTCGCCGCTGACGGCAGCGAGCCGGAT CTCTCCGCGCAGGCGCTGACCGAGAAAGGCGTCCTGTTTAACTCCGGCGAGTTCAGCGGC CTCGATTATGAAGCCGGCTTCAACGCCATTGCCGACAAACTGGCAGCCATGGGC |
pgi (600 bp) |
GACCGTGCGGTACTGCACGTCGCGCTGCGCAACCGCAGCAATACGCCGATTGTGGTTGAT GGCAAAGATGTGATGCCGGAAGTGAACGCTGTGCTGGAGAAGATGAAAACCTTCTCAGAA GCGATTATCTCCGGTAGCTGGAAAGGCTATACCGGCAAACCGATCACCGACGTGGTTAAC ATTGGTATCGGCGGTTCCGACCTCGGTCCGTTCATGGTCACCGAAGCGCTGCGTCCGTAC AAAAACCACCTCAACATGCACTTTGTCTCCAACGTCGATGGCACCCACATCGCTGAAGTG CTGAAGAACGTCAACCCGGAAACGACCCTGTTCCTGGTGGCGTCCAAGACCTTCACCACT CAGGAAACCATGACCAACGCCCACAGCGCGCGCGACTGGTTCCTGGCGACCGCGGGCGAC GACAAACACGTGGCCAAACACTTCGCGGCGCTTTCTACCAACGCGAAAGCGGTTGGCGAG TTCGGCATCGACACCGCCAACATGTTTGAATTCTGGGACTGGGTTGGCGGCCGTTACTCC CTGTGGTCGGCGATTGGCCTGTCCATCATTCTCTCCGTGGGCTTCGACAACTTCGTTGAG |
pgk (444 bp) |
GCGTGCGCAGGCCCGCTGCTGGCCGCTGAACTGGACGCGCTGGGTAAAGCGCTGAAAGAG CCGGCTCGTCCGATGGTCGCTATCGTGGGTGGTTCTAAAGTGTCCACCAAACTGACCGTG CTGGATTCCCTGTCTAAAATCGCTGACCAGCTGATCGTCGGCGGCGGTATCGCCAACACC TTCGTTGCTGCCCAGGGCCACAACGTCGGTAAATCCCTGTACGAAGCAGACCTGGTTGAT GAAGCTAAGCGCCTGCTGAGCACCTGTGATATCCCGGTTCCGACGGACGTTCGCGTCGCG ACCGAGTTCTCCGAAACCGCAACGGCAACCCTGAAATCTGTTAACGACATCAAAGATGAC GAGCAGATTCTGGACCTTGGCGACGTTTCCGCACAGAAACTGGCCGACATCCTGAAAAAC GCCAAAACCATCCTGTGGAACGGC |
phoE (453 bp) |
GATTCCTCTGCCCAGACCGATAACTTTATGACCAAACGCGCCAGCGGCCTGGCGACCTAC CGCAATACCGATTTCTTCGGTCTGGTGGATGGTCTGGATATGACCCTGCAGTACCAGGGT AAAAACGAAGGCCGTGAAGCGAAGAAACAGAACGGCGACGGCGTTGGCACCTCATTAAGC TATGATTTCGGCGGCAGCGACTTCGCCGTCAGCGCGGCCTACACCAGCTCCGACCGTACC AACGATCAGAACCTGCTGGCCCGCGGCCAGGGTTCGAAAGCGGAAGCCTGGGCGACCGGC CTGAAATATGACGCCAACAATATCTACCTGGCGACCATGTATTCTGAGACCCGCAAAATG ACCCCGATCAGCGGCGGTTTTGCCAACAAAGCGCAGAACTTTGAAGCGGTGGCGCAGTAT CAGTTCGACTTCGGTCTGCGTCCGTCCCTCGGC |
pyrG (522 bp) |
ACGTCCTTGCGCATCGCACTGATTGGCCGTGAGTCAGACCACCGTCTGGTCTACCCCGCC ACGCTTGGCTCACTGGGTGATGCCGCGGCGTCGCTGGGGCTGAACCTGGAGGTCCATTTC TTCGCGCCGGTCAGTCTGTCCCCTGGGTTACACGACCTCCACGACGTCCAGGGCGTCGTG TTGCCAGGCGGTTCCTCGATGGCCGCCGTCAAGGGACAAATCCGCGTGGCGGAAGATACG CTTGCCCGCGGACAGCCCACGCTGGGGTTATGCCTGGGAATGCAGAGCATGATGACCGCA GTCGTGCGCCGACGTCCGGGTTGCGAATCAGCCATTCCCGCCGAAGTGGCTCCGGATGAG GCTCTGCACAGCTTTGTTCCCTTTGTTGATGGCCGTCATCGCTGCGGCGTATTCCCTTTT TCCTTCGGGTTGATCCCCGGTGATATCCGCGAAATGCACTACAACCATCGCTACTGCTTT AACACCGACTTATTACCGGCGCTGGATCGCAGCGGGGTCAGC |
rpoB (513 bp) |
ATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGCGCAGGCTTCGAAGTTCGAGAC GTACACCCGACGCACTACGGTCGCGTATGTCCAATCGAAACGCCTGAAGGTCCGAACATC GGTCTGATCAACTCCCTGTCCGTGTACGCACAGACTAACGAATACGGTTTCCTTGAGACC CCGTATCGTAAAGTGACCGACGGTGTGGTTACCGATGAAATTCACTACCTGTCTGCTATC GAAGAAGGCAACTACGTTATTGCTCAGGCGAACTCCAACCTGGATGAAAACGGCCACTTC GTAGAAGACCTGGTTACCTGCCGTAGCAAAGGCGAATCCAGCTTGTTCAGCCGCGACCAG GTTGACTACATGGACGTATCCACCCAGCAGGTGGTATCCGTCGGTGCGTCCCTGATCCCG TTCCTGGAGCACGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCG GTTCCGACTCTGCGCGCTGATAAGCCGCTGGTT |
fusA (561 bp) |
AACCAGACCATCATCGCCGGTATGGGTGAGCTGCACCTCGACATCATCGTTGACCGTATG AAGCGTGAATTCAACGTTGAAGCGAACGTCGGTAAACCTCAGGTTGCTTACCGTGAAGCG ATTCGCGCGAAAGTTACCGATATCGAAGGTAAACACGCCAAGCAGTCTGGTGGTCGTGGT CAGTACGGTCACGTTGTGATCGACATGTACCCGCTGGAGCCGGGCTCTAACCCGAAAGGT TACGAGTTCATCAACGACATCAAAGGTGGTGTAATTCCTGGCGAATACATCCCGGCCGTT GATAAAGGCATCCAGGAACAGCTGAAAGCTGGTCCGCTGGCAGGTTACCCGGTAGTTGAT ATGGGTATCCGTCTGCACTTCGGTTCTTACCACGACGTTGACTCCTCTGAGCTGGCGTTT AAACTGGCTGCGTCTATTGCCTTTAAAGAAGGCTTTAAGAAGGCAAAACCAGTTCTGCTT GAGCCGATCATGAAGGTTGAAGTAGAAACTCCGGAAGAGAACACTGGTGATGTTATCGGT GACTTGAGCCGTCGTCGCGGT |
ST | Origin | Sample | ESBL/Carba- penemase |
Country | Accession | Strain | leuS | pgi | pgk | phoE | pyrG | rpoB | fusA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | Human | Blood | SHV-2 | Mexico | CDMV00000000 | 801 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Blood | SHV-2a | Mexico | 25886267 | 805 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Blood | SHV-2 | Mexico | 25886267 | 806 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Blood | SHV-2a | Mexico | 25886267 | 807 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Blood | SHV-2a | Mexico | 25886267 | 808 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Blood | SHV-2a | Mexico | 25886267 | 809 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Blood | SHV-2a | Mexico | 25886267 | 811 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Blood | SHV-2a | Mexico | 25886267 | 812 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Urine | Negative | USA | QIYN01000001.1 | WUSM_KV_09 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
2 | Human | Sputum | Negative | Mexico | CEGG00000000 | 8917 | 1 | 2 | 2 | 1 | 2 | 1 | 2 |
3 | Plant | Banana root | Negative | Mexico | CXPC00000000 | 6A2 | 1 | 3 | 3 | 2 | 3 | 1 | 3 |
3 | Human | Blood | Negative | Italy | UJZQ01000001.1 | EuSCAPE_IT012 | 1 | 3 | 3 | 2 | 3 | 1 | 3 |
3 | Human | Blood | Negative | Serbia | UKAM01000001.1 | EuSCAPE_RS065 | 1 | 3 | 3 | 2 | 3 | 1 | 3 |
4 | Human | Abscess | CTX-M-15 | Mexico | CXOZ00000000 | 06-268 | 1 | 1 | 4 | 2 | 4 | 2 | 2 |
5 | Human | Blood | Negative | Mexico | CXPB00000000 | 4880 | 1 | 4 | 5 | 3 | 1 | 1 | 4 |
6 | Plant | Sugar cane stem | Negative | Mexico | CXPA00000000 | T29A | 2 | 5 | 6 | 4 | 5 | 1 | 2 |
7 | Insect | Fungus matrix | Negative | Panama | CP001891.1 | At-22 | 3 | 1 | 7 | 1 | 6 | 3 | 4 |
8 | Plant | Maize stems | Negative | USA | CP000964.1 | 342 | 1 | 6 | 8 | 5 | 7 | 1 | 5 |
9 | Plant | Banana roots | Negative | China | CP009274 | DX120E | 1 | 6 | 9 | 1 | 8 | 1 | 2 |
10 | Human | Gut | Negative | Denmark | CBBA000000000 | CAG:634 | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
10 | Human | Blood | SHV-12 (LEN-type negative) | China | CP030173.1 | 13450 | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
10 | Human | Wound swab | Negative | Tanzania | OVDM01000001.1 | KCRI-198C | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
10 | Human | Sputum | Negative | Tanzania | OVDP01000001.1 | KCRI-201B | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
10 | Human | Respiratory | SHV-30 | USA | SRX2681986 | KPN1264 | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
10 | Human | Urine | Negative | USA | QIXS01000001.1 | WUSM_KV_30 | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
10 | Human | Urine | Negative | USA | QIXM01000001.1 | WUSM_KV_36 | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
11 | plant | Banana root | Negative | China | CP010523 | DSM15968 | 4 | 7 | 5 | 1 | 10 | 1 | 4 |
11 | Plant | Banana root | Negative | Mexico | 15053318 | F2R9 (ATCC BAA-830) | 4 | 7 | 5 | 1 | 10 | 1 | 4 |
12 | Human | Faeces | negative | Braziil | JDWA00000000 | BZ19 | 5 | 8 | 11 | 1 | 11 | 1 | 4 |
13 | Insect | Nezara viridula (Cotton Pathogen Vector; southern green stink bug) | negative | USA | CP008700.1 | KP5-1 | 6 | 6 | 4 | 7 | 11 | 1 | 2 |
14 | Human | Pus | CTX-M-15/KPC-6 | Malaysia | JRTV00000000 | 223/14 | 7 | 3 | 6 | 8 | 12 | 4 | 3 |
15 | Plant | Bitter gourd | negative | Malaysia | JSWX00000000 | B1 | 8 | 4 | 12 | 9 | 1 | 1 | 2 |
16 | Plant | Chili | negative | Malaysia | JSXA00000000 | CH4 | 9 | 3 | 12 | 8 | 3 | 5 | 2 |
16 | Human | Urine | negative | USA | JMWB00000000 | BIDMC61 | 9 | 3 | 12 | 8 | 3 | 5 | 2 |
17 | Human | Respiratory | negative | USA | AYJK00000000 | MGH20 | 1 | 1 | 1 | 1 | 4 | 1 | 2 |
18 | missing | Urine | negative | USA | AYIX00000000 | MGH40 | 10 | 9 | 6 | 1 | 13 | 1 | 6 |
19 | missing | missing | negative | USA | AYIF00000000 | UCICRE10 | 1 | 4 | 1 | 1 | 11 | 1 | 2 |
20 | Human | Urine | negative | USA | JCML00000000 | UCI18 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | missing | negative | USA | LFAP00000000 | MGH114 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | Unknown | negative | Germany | UIDW01000001.1 | ID_2 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | Unknown | negative | Germany | UIDT01000001.1 | ID_5 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | Unknown | negative | Germany | UIDV01000001.1 | ID_6 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | Unknown | negative | Germany | UIDM01000001.1 | ID_8 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | Urine | negative | Belgium | UKAV01000001.1 | EuSCAPE_BE029 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | Unknown | negative | Germany | UIDI01000001.1 | ID_11 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | Urine | negative | USA | QIXC01000001.1 | WUSM_KV_46 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
21 | Human | Urine | negative | USA | JMZD00000000 | MGH68 | 11 | 5 | 5 | 11 | 11 | 1 | 2 |
22 | Human | Urine | negative | USA | JMZM00000000 | MGH80 | 11 | 3 | 6 | 12 | 11 | 6 | 4 |
23 | Human | missing | negative | USA | LFBA00000000 | BIDMC88 | 1 | 11 | 10 | 6 | 9 | 1 | 2 |
24 | Human | missing | negative | USA | LFBC00000000 | BIDMC90 | 12 | 12 | 10 | 1 | 15 | 1 | 4 |
25 | Human | missing | negative | USA | LFAD00000000 | MGH92 | 9 | 13 | 13 | 13 | 7 | 1 | 4 |
26 | Human | missing | negative | USA | ACXA00000000 | 1.1.55 | 9 | 10 | 13 | 13 | 7 | 1 | 4 |
27 | Human | missing | negative | USA | ASQN00000000 | KTE92 | 11 | 6 | 5 | 1 | 16 | 4 | 4 |
28 | Human | Blood | negative | Mexico | 15053318 | 1109 | 1 | 1 | 4 | 2 | 17 | 2 | 2 |
29 | Human | Catheter | negative | Mexico | 15053318 | 1171 | 1 | 4 | 3 | 14 | 18 | 1 | 3 |
30 | Human | Secretion | negative | Mexico | 25886267 | 9351 | 1 | 14 | 5 | 1 | 19 | 1 | 4 |
31 | Human | Biliary liquids | negative | Mexico | 25886267 | 9353 | 13 | 15 | 1 | 1 | 20 | 1 | 2 |
32 | Human | Abscess | negative | Mexico | 25886267 | 9925 | 14 | 16 | 14 | 15 | 21 | 7 | 2 |
32 | Human | Blood | negative | Mexico | 26571390 | 10239 | 14 | 16 | 14 | 15 | 21 | 7 | 2 |
32 | Human | Sputum | negative | USA | JVTE01000001 | 1335_KPNE | 14 | 16 | 14 | 15 | 21 | 7 | 2 |
32 | Human | Blood | negative | USA | SRX2682028 | KPN700 | 14 | 16 | 14 | 15 | 21 | 7 | 2 |
32 | Human | Other (CAPD) | negative | Portugal | UJZY01000001.1 | EuSCAPE_PT079 | 14 | 16 | 14 | 15 | 21 | 7 | 2 |
33 | Plant | Banana stem | negative | Mexico | 15053318 | VI | 15 | 6 | 15 | 1 | 22 | 1 | 2 |
34 | Plant | Rice roots | negative | Mexico | 15053318 | CFN2006 | 1 | 3 | 5 | 16 | 1 | 8 | 2 |
35 | Human | Vaginal secretion | negative | Mexico | 29692906 | 10447 | 16 | 1 | 5 | 1 | 1 | 1 | 6 |
36 | Human | missing | negative | Mexico | This work | 9271 | 1 | 4 | 16 | 2 | 23 | 9 | 2 |
37 | Human | missing | negative | Mexico | This work | 9274 | 17 | 17 | 1 | 1 | 24 | 1 | 5 |
37 | Human | Wound, drain right lower quadrant | negative | Mexico | QIYH01000001.1 | WUSM_KV_15 | 17 | 17 | 1 | 1 | 24 | 1 | 5 |
38 | Human | missing | negative | Mexico | This work | 11212 | 1 | 4 | 10 | 6 | 1 | 1 | 2 |
39 | Human | missing | negative | Mexico | This work | 11214 | 11 | 6 | 13 | 2 | 25 | 3 | 4 |
40 | Human | missing | negative | Mexico | This work | 11226 | 1 | 18 | 17 | 17 | 1 | 10 | 2 |
41 | Human | missing | negative | Mexico | This work | 11248 | 2 | 5 | 10 | 1 | 1 | 1 | 2 |
41 | Environmental | Soil | negative | Singapore | CP013985.1 | LMG23571 | 2 | 5 | 10 | 1 | 1 | 1 | 2 |
42 | Human | Sputum | negative | Mexico | This work | 11254 | 18 | 6 | 4 | 1 | 1 | 6 | 2 |
43 | Human | missing | negative | Mexico | This work | 11435 | 17 | 17 | 1 | 1 | 26 | 1 | 5 |
44 | Human | missing | negative | Mexico | This work | 11463 | 12 | 19 | 13 | 1 | 27 | 1 | 4 |
45 | Human | missing | negative | Mexico | This work | 11436 | 1 | 1 | 6 | 18 | 28 | 1 | 4 |
46 | Plant | Sugarcane rhizosphere soil | negative | Mexico | This work | KvMx3 | 2 | 5 | 18 | 19 | 1 | 1 | 2 |
47 | Plant | Sugarcane rhizosphere soil | negative | Mexico | This work | KvMx4 | 19 | 15 | 6 | 20 | 22 | 1 | 6 |
48 | Plant | Maize rhizosphere soil | negative | Mexico | This work | KvMx18 | 11 | 10 | 19 | 1 | 4 | 1 | 2 |
49 | Human | Sputum | negative | USA | JVDU01000001.1 | 521_SSON | 1 | 20 | 6 | 21 | 1 | 7 | 2 |
49 | Human | Bronchoalveolar Lavage | negative | USA | JVDR01000001.1 | 524_SBOY | 1 | 20 | 6 | 21 | 1 | 7 | 2 |
42 | Human | Sputum | negative | USA | JUYL01000001.1 | 653_KVAR | 1 | 20 | 6 | 21 | 1 | 7 | 2 |
50 | Human | Fluid | negative | USA | JUXS01000001.1 | 671_KVAR | 1 | 3 | 6 | 22 | 3 | 8 | 2 |
51 | Human | Tracheal Aspirate | negative | USA | JUTF01000001.1 | 780_KPNE | 1 | 20 | 1 | 23 | 29 | 9 | 4 |
51 | Human | Tracheal Aspirate | negative | USA | JURI01000001.1 | 833_KPNE | 1 | 20 | 1 | 23 | 29 | 9 | 4 |
51 | Human | Tracheal Aspirate | negative | USA | JURH01000001.1 | 834_KPNE | 1 | 20 | 1 | 23 | 29 | 9 | 4 |
51 | Human | Tracheal Aspirate | negative | USA | JURG01000001.1 | 835_KPNE | 1 | 20 | 1 | 23 | 29 | 9 | 4 |
51 | Human | Tracheal Aspirate | negative | USA | JURF01000001.1 | 836_KPNE | 1 | 20 | 1 | 23 | 29 | 9 | 4 |
51 | Human | Tracheal Aspirate | negative | USA | JURE01000001.1 | 837_KPNE | 1 | 20 | 1 | 23 | 29 | 9 | 4 |
51 | Human | Urine catheter | negative | USA | QIYM01000001.1 | WUSM_KV_10 | 1 | 20 | 1 | 23 | 29 | 9 | 4 |
52 | Human | Urine, Catheterized | negative | USA | JUSW01000001.1 | 789_KVAR | 1 | 4 | 3 | 24 | 11 | 1 | 2 |
53 | Human | Body fluid | KPC-2 | USA | PTGT01000001.1 | 1565/2503 | 1 | 21 | 1 | 25 | 30 | 11 | 4 |
54 | Human | Unknown | negative | Vietnam | ERR025463 | 1892m | 1 | 5 | 5 | 1 | 1 | 1 | 2 |
54 | Human | missing | negative | USA | NGSP01000001.1 | BIDMC118 | 1 | 5 | 5 | 1 | 1 | 1 | 2 |
55 | Human | missing | negative | Mexico | This work | 11446 | 20 | 22 | 20 | 26 | 31 | 12 | 7 |
56 | Human | Unknown | negative | Australia | ERS005747 | AJ026 | 21 | 18 | 3 | 2 | 1 | 13 | 2 |
56 | Human | Unknown | negative | Australia | ERS005771 | AJ182 | 21 | 18 | 3 | 2 | 1 | 13 | 2 |
56 | Human | Trach asp | negative | USA | QIYS01000001.1 | WUSM_KV_04 | 21 | 18 | 3 | 2 | 1 | 13 | 2 |
56 | Human | Urine | negative | USA | QIYF01000001.1 | WUSM_KV_17 | 21 | 18 | 3 | 2 | 1 | 13 | 2 |
56 | Human | Urine | negative | USA | QIXD01000001.1 | WUSM_KV_45 | 21 | 18 | 3 | 2 | 1 | 13 | 2 |
57 | Human | Unknown | negative | Australia | ERS005754 | AJ135 | 22 | 6 | 6 | 27 | 1 | 1 | 8 |
57 | Human | Blood | CTX-M-15/OXA-1 | Netherlands | JXJH01000001.1 | KP-21F | 22 | 6 | 6 | 27 | 1 | 1 | 8 |
58 | Human | Unknown | negative | Australia | ERS005778 | AJ292 | 6 | 4 | 1 | 28 | 32 | 14 | 2 |
59 | missing | missing | negative | USA | MPCI01000001.1 | AR_0016 | 23 | 19 | 5 | 29 | 2 | 1 | 4 |
59 | Human | Urine | negative | USA | QIXW01000001.1 | WUSM_KV_26 | 23 | 19 | 5 | 29 | 2 | 1 | 4 |
60 | Human | Blood | CTX-M-15 | Bangladesh | QUAA01000001.1 | BD.DM.32 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15 | Bangladesh | QTZQ01000001.1 | BD.DM.33 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15/NDM-1 | Bangladesh | QTZR01000001.1 | BD.DM.97 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15/NDM-1 | Bangladesh | QTZS01000001.1 | BD.DM.115 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15/NDM-1 | Bangladesh | PJOO01000001.1 | BD.DM.165 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15/NDM-1 | Bangladesh | QTZT01000001.1 | BD.DM.166 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15/NDM-1 | Bangladesh | QTZU01000001.1 | BD.DM.167 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15 | Bangladesh | QTZV01000001.1 | BD.DM.169 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15 | Bangladesh | QTZW01000001.1 | BD.DM.322 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15 | Bangladesh | QTZX01000001.1 | BD.DM.323 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15 | Bangladesh | QTZY01000001.1 | BD.DM.395 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
61 | Human | missing | KPC-2 | USA | NGSO01000001.1 | BIDMC117 | 1 | 9 | 6 | 1 | 13 | 1 | 6 |
61 | Human | Urine | negative | USA | QIXP01000001.1 | WUSM_KV_33 | 1 | 9 | 6 | 1 | 13 | 1 | 6 |
62 | Plant | Roots of tall fescue | negative | China | LOAR00000000 | D5A | 10 | 9 | 6 | 1 | 32 | 1 | 6 |
62 | Human | Unknown | negative | Germany | UIDS01000001.1 | ID_24 | 10 | 9 | 6 | 1 | 32 | 1 | 6 |
63 | Plant | Roots Maize | negative | China | NZ_CP016344.1 | E57-7 | 9 | 3 | 12 | 31 | 3 | 5 | 2 |
64 | Environmental | river water | NDM-9 | South Korea | NZ_CP017284.1 | GJ1 | 1 | 3 | 6 | 8 | 11 | 1 | 9 |
64 | Environmental | river water | NDM-9 | South Korea | NZ_CP017849.1 | GJ2 | 1 | 3 | 6 | 8 | 11 | 1 | 9 |
64 | Environmental | river water | CTX-M-65/NDM-9 | South Korea | NZ_CP017289.1 | GJ3 | 1 | 3 | 6 | 8 | 11 | 1 | 9 |
65 | Human | Unknown | CTX-M-148 | China | MOSU00000000 | H39 | 24 | 3 | 1 | 32 | 33 | 15 | 4 |
65 | Human | Pulmonary | CTX-M-24 (two copies) | China | CP018307 | X39 | 24 | 3 | 1 | 32 | 33 | 15 | 4 |
66 | Human | Unknown | negative | Germany | UIDY01000001.1 | ID_16 | 13 | 23 | 5 | 33 | 19 | 1 | 10 |
66 | Human | Unknown | negative | Germany | UIDU01000001.1 | ID_18 | 13 | 23 | 5 | 33 | 19 | 1 | 10 |
66 | Human | Unknown | negative | Germany | UIEF01000001.1 | ID_19 | 13 | 23 | 5 | 33 | 19 | 1 | 10 |
67 | Human | Unknown | negative | Germany | UIFG01000001.1 | ID_43 | 13 | 23 | 5 | 34 | 19 | 1 | 10 |
68 | Human | Unknown | negative | Germany | UIFD01000001.1 | ID_49 | 1 | 18 | 6 | 1 | 34 | 13 | 2 |
68 | Human | Blood | negative | Croatia | UKAN01000001.1 | EuSCAPE_HR085 | 1 | 18 | 6 | 1 | 34 | 13 | 2 |
69 | Human | Blood | DHA-1, SHV-12, CTX-M-14, KPC-2 | Bangladesh | NPGY01000001.1 | K2631 | 25 | 21 | 3 | 35 | 35 | 1 | 2 |
70 | Human | Wound swab | negative | Tanzania | OVDF01000001.1 | KCRI-152E | 26 | 10 | 1 | 36 | 1 | 13 | 2 |
71 | Human | Catheter | KPC-2 | Colombia | MSZI01000001.1 | KP007 | 9 | 4 | 6 | 24 | 1 | 1 | 2 |
72 | Human | Urine | SHV-12 | USA | SRX2681305 | KPN325 | 19 | 5 | 5 | 6 | 10 | 1 | 2 |
73 | Human | Blood | SHV-12 | USA | SRX2680563 | KPN458 | 11 | 9 | 6 | 20 | 1 | 13 | 2 |
73 | Human | Urine | negative | USA | QIXA01000001.1 | WUSM_KV_48 | 11 | 9 | 6 | 20 | 1 | 13 | 2 |
74 | Human | Urine | CTX-M-15 | USA | SRX2681541 | KPN807 | 27 | 4 | 3 | 1 | 35 | 1 | 2 |
75 | Human | Respiratory | KPC-2 | USA | SRX2681803 | KPN1401 | 1 | 1 | 15 | 1 | 1 | 11 | 4 |
75 | Human | Respiratory | TEM-69/KPC-2 | USA | SRX2681790 | KPN1415 | 1 | 1 | 15 | 1 | 1 | 11 | 4 |
76 | Human | Urine | CTX-M-15/NDM-1 | USA | SRX2681713 | KPN1481 | 28 | 24 | 5 | 37 | 36 | 1 | 2 |
77 | Human | Wound | SHV-12 | USA | SRX2681646 | KPN1556 | 11 | 1 | 3 | 1 | 11 | 1 | 2 |
77 | Human | Urine | negative | USA | QIWX01000001.1 | WUSM_KV_51 | 11 | 1 | 3 | 1 | 11 | 1 | 2 |
78 | Human | Urine | SHV-12/SHV-66 | USA | SRX2681570 | KPN1751 | 1 | 6 | 10 | 3 | 37 | 1 | 4 |
78 | Human | Urine | negative | Belgium | UKAP01000001.1 | EuSCAPE_BE032 | 1 | 6 | 10 | 3 | 37 | 1 | 4 |
79 | Human | Urine | negative | India | LZGB01000001.1 | KV093 | 15 | 6 | 1 | 1 | 38 | 14 | 4 |
80 | Plant/Fungus | Mycorrhiza of Pisolithus tinctorius | negative | China | LQMR01000001.1 | KV321 | 29 | 4 | 6 | 1 | 1 | 14 | 4 |
81 | Human | Catheter | negative | Mexico | This work | 9635 | 2 | 6 | 12 | 38 | 39 | 16 | 4 |
82 | Plant | Root of a sugarcane plant | negative | Mexico | FLLH01000001 | KvMx2 | 30 | 25 | 21 | 39 | 40 | 17 | 4 |
83 | Human | Faeces | negative | China | NLDD01000001 | L18 | 31 | 24 | 22 | 40 | 41 | 1 | 11 |
84 | Environmental | Industrial effluent | negative | Pakistan | MSCS01000001 | MB351 | 11 | 26 | 2 | 41 | 1 | 1 | 6 |
85 | Animal | Bovine - Mastitis | negative | Canada | LFYK01000000 | NL58 | 1 | 10 | 14 | 42 | 2 | 13 | 6 |
85 | Animal | Bovine - Mastitis | negative | Canada | LGAW01000000 | NL49 | 1 | 10 | 14 | 42 | 2 | 13 | 6 |
86 | Animal | Bovine - Intestinal | negative | USA | ERS011908 | QMP_B2-288 | 11 | 27 | 5 | 41 | 1 | 1 | 6 |
86 | Human | Urine | negative | Greece | UKAQ01000001.1 | EuSCAPE_GR014 | 11 | 27 | 5 | 41 | 1 | 1 | 6 |
87 | Animal | Bovine - Intestinal | negative | USA | ERS011920 | QMP_B2-340 | 13 | 28 | 3 | 9 | 1 | 1 | 2 |
87 | Animal | Bovine - Intestinal | negative | USA | ERS011926 | QMP_B2-483 | 13 | 28 | 3 | 9 | 1 | 1 | 2 |
88 | Animal | Bovine - Intestinal | negative | USA | ERS011925 | QMP_B2-481 | 2 | 1 | 3 | 38 | 4 | 18 | 6 |
89 | Animal | Bovine - Intestinal | Negative (LEN-type negative) | USA | ERS011933 | QMP_M1-043 | 1 | 17 | 1 | 25 | 42 | 1 | 4 |
90 | Animal | Unknown | negative | USA | ERS011961 | QMP_M1-428 | 32 | 29 | 3 | 24 | 35 | 19 | 4 |
91 | Animal | Urine | Negative (LEN-type negative) | USA | ERS011977 | QMP_M1-893 | 33 | 6 | 1 | 11 | 43 | 1 | 4 |
92 | Human | missing | CTX-M-15/KPC-2 | China | PWAV01000001.1 | SCKV020062 | 1 | 6 | 23 | 43 | 1 | 1 | 4 |
92 | Human | missing | CTX-M-15/KPC-2 | China | PWAU01000001.1 | SCKV020067 | 1 | 6 | 23 | 43 | 1 | 1 | 4 |
92 | Human | missing | CTX-M-15/KPC-2 | China | PWAT01000001.1 | SCKV020069 | 1 | 6 | 23 | 43 | 1 | 1 | 4 |
92 | Human | Unknown | negative | China | NZ_CP028555.1 | WCHKP19 | 1 | 6 | 23 | 43 | 1 | 1 | 4 |
93 | Human | missing | NDM-5 | China | NWEW01000001.1 | SCKV020148 | 1 | 3 | 3 | 2 | 3 | 20 | 3 |
94 | Human | missing | CTX-M-15 | South Africa | NXJG01000001.1 | ST-1791-KOO1 | 34 | 6 | 6 | 1 | 35 | 1 | 4 |
95 | Environmental | GM-anode biofilm | negative | missing | DBMQ01000001.1 | UBA694 | 18 | 24 | 5 | 1 | 1 | 1 | 4 |
96 | Environmental | Metal/Plastic | negative | USA | DFSA01000001.1 | UBA3449 | 11 | 4 | 10 | 6 | 44 | 8 | 2 |
97 | Environmental | Metal/Plastic | negative | USA | DGAC01000001.1 | UBA4040 | 13 | 24 | 6 | 30 | 1 | 1 | 2 |
98 | Human | Unknown | negative | China | NZ_CP027064.2 | WCHKV030666 | 28 | 30 | 5 | 37 | 1 | 1 | 2 |
99 | Human | Unknown | negative | China | NWEJ01000001.1 | WCHKV030937 | 35 | 4 | 6 | 1 | 1 | 1 | 2 |
100 | Human | Urine | negative | USA | QIYV01000001.1 | WUSM_KV_01 | 6 | 24 | 5 | 1 | 1 | 1 | 4 |
101 | Human | Unknown | negative | USA | QIYV01000001.1 | WUSM_KV_02 | 2 | 5 | 6 | 3 | 5 | 1 | 2 |
102 | Human | Aspirate, left breast | negative | USA | QIYT01000001.1 | WUSM_KV_03 | 23 | 19 | 2 | 8 | 45 | 1 | 2 |
103 | Human | Sputum | negative | USA | QIYQ01000001.1 | WUSM_KV_06 | 36 | 6 | 10 | 3 | 37 | 1 | 4 |
103 | Human | Urine | negative | USA | QIXK01000001.1 | WUSM_KV_38 | 36 | 6 | 10 | 3 | 37 | 1 | 4 |
103 | Human | Wound | negative | USA | QIWZ01000001.1 | WUSM_KV_49 | 36 | 6 | 10 | 3 | 37 | 1 | 4 |
103 | Human | Blood | negative | Germany | UJZE01000001.1 | EuSCAPE_DE052 | 36 | 6 | 10 | 3 | 37 | 1 | 4 |
104 | Human | Urine | negative | USA | QIYP01000001.1 | WUSM_KV_07 | 2 | 27 | 6 | 2 | 1 | 13 | 6 |
105 | Human | Drainage, left groin | negative | USA | QIYO01000001.1 | WUSM_KV_08 | 2 | 6 | 1 | 25 | 32 | 11 | 2 |
105 | Human | Tibia | negative | USA | QIYL01000001.1 | WUSM_KV_11 | 2 | 6 | 1 | 25 | 32 | 11 | 2 |
105 | Human | Urine | negative | Italy | UJZU01000001.1 | EuSCAPE_IT360 | 2 | 6 | 1 | 25 | 32 | 11 | 2 |
106 | Human | Urine | negative | USA | QIYK01000001.1 | WUSM_KV_12 | 5 | 31 | 5 | 44 | 46 | 13 | 2 |
107 | Human | Urine | negative | USA | QIYJ01000001.1 | WUSM_KV_13 | 37 | 32 | 1 | 3 | 37 | 7 | 4 |
108 | Human | Blood | negative | USA | QIYI01000001.1 | WUSM_KV_14 | 38 | 33 | 24 | 45 | 47 | 1 | 6 |
108 | Human | Urine | negative | USA | QIYD01000001.1 | WUSM_KV_19 | 38 | 33 | 24 | 45 | 47 | 1 | 6 |
109 | Human | Blood | negative | USA | QIYG01000001.1 | WUSM_KV_16 | 39 | 1 | 1 | 1 | 1 | 1 | 1 |
110 | Human | Urine | negative | USA | QIYE01000001.1 | WUSM_KV_18 | 11 | 1 | 6 | 46 | 48 | 2 | 4 |
111 | Human | Urine | negative | USA | QIYB01000001.1 | WUSM_KV_21 | 40 | 27 | 6 | 3 | 1 | 13 | 6 |
112 | Human | Urine | negative | USA | QIYA01000001.1 | WUSM_KV_22 | 41 | 5 | 6 | 8 | 4 | 2 | 2 |
112 | Human | Urine | negative | USA | QIXZ01000001.1 | WUSM_KV_23 | 41 | 5 | 6 | 8 | 4 | 2 | 2 |
112 | Human | Blood | negative | USA | QIXY01000001.1 | WUSM_KV_24 | 41 | 5 | 6 | 8 | 4 | 2 | 2 |
113 | Human | Blood | negative | USA | QIXX01000001.1 | WUSM_KV_25 | 14 | 1 | 6 | 1 | 36 | 1 | 2 |
113 | Human | Urine | negative | USA | QIXN01000001.1 | WUSM_KV_35 | 14 | 1 | 6 | 1 | 36 | 1 | 2 |
114 | Human | Urine | negative | USA | QIXV01000001.1 | WUSM_KV_27 | 1 | 28 | 6 | 43 | 49 | 13 | 2 |
115 | Human | Urine | negative | USA | QIXU01000001.1 | WUSM_KV_28 | 11 | 23 | 6 | 1 | 35 | 1 | 10 |
116 | Human | Urine | negative | USA | QIXT01000001.1 | WUSM_KV_29 | 2 | 4 | 6 | 24 | 4 | 21 | 2 |
116 | Human | Urine | negative | USA | QIXQ01000001.1 | WUSM_KV_32 | 2 | 4 | 6 | 24 | 4 | 21 | 2 |
117 | Human | Urine | negative | USA | QIXR01000001.1 | WUSM_KV_31 | 42 | 1 | 3 | 47 | 1 | 7 | 12 |
118 | Human | Urine | negative | USA | QIXL01000001.1 | WUSM_KV_37 | 41 | 5 | 6 | 8 | 35 | 2 | 2 |
119 | Human | Urine | negative | USA | QIXJ01000001.1 | WUSM_KV_39 | 1 | 18 | 12 | 1 | 34 | 12 | 2 |
120 | Human | Urine | negative | USA | QIXH01000001.1 | WUSM_KV_41 | 35 | 27 | 6 | 3 | 1 | 13 | 6 |
121 | Human | Urine | negative | USA | QIXE01000001.1 | WUSM_KV_44 | 38 | 34 | 1 | 1 | 35 | 1 | 10 |
122 | Human | Bronchial wash | negative | USA | QIWY01000001.1 | WUSM_KV_50 | 5 | 8 | 7 | 40 | 11 | 11 | 4 |
123 | Human | Urine | negative | USA | QIWW01000001.1 | WUSM_KV_52 | 1 | 3 | 12 | 1 | 1 | 10 | 2 |
124 | Human | Urine | negative | USA | QIWV01000001.1 | WUSM_KV_53 | 9 | 4 | 5 | 1 | 32 | 13 | 4 |
125 | Human | Blood | CTX-M-14/KPC-2 | USA | QIWU01000001.1 | WUSM_KV_54 | 43 | 1 | 3 | 38 | 4 | 1 | 4 |
125 | Human | Urine | negative | Austria | UJZA01000001.1 | EuSCAPE_AT005 | 43 | 1 | 3 | 38 | 4 | 1 | 4 |
126 | Human | BAL | negative | USA | QIWT01000001.1 | WUSM_KV_55 | 1 | 19 | 1 | 38 | 1 | 1 | 4 |
127 | Human | UR CVS | negative | USA | QIVS01000001.1 | WUSM_KV_82 | 1 | 10 | 6 | 45 | 22 | 7 | 6 |
128 | Human | Blood | negative | USA | QIVD01000001.1 | WUSM_KV_97 | 1 | 35 | 1 | 48 | 35 | 1 | 2 |
129 | Human | Blood | negative | USA | QIUP01000001.1 | WUSM_KV_111 | 13 | 6 | 6 | 41 | 50 | 2 | 4 |
130 | Human | missing | SHV-40/KPC-2 | USA | PGIO01000001.1 | YD626-2 | 1 | 4 | 5 | 6 | 9 | 1 | 2 |
131 | Plant | Potato | negative | Japan | AP014950.1 | YH43 | 44 | 22 | 20 | 49 | 51 | 22 | 7 |
132 | Human | Puncture Fluids | negative | Belgium | UKAT01000001.1 | EuSCAPE_BE101 | 28 | 30 | 3 | 37 | 1 | 1 | 2 |
133 | Human | Other (gall bladder) | negative | Germany | UJZJ01000001.1 | EuSCAPE_DE018 | 13 | 15 | 1 | 1 | 22 | 1 | 2 |
134 | Human | Wound Secretion | negative | Germany | UJZI01000001.1 | EuSCAPE_DE056 | 2 | 4 | 3 | 38 | 52 | 18 | 4 |
135 | Human | Wound Secretion | negative | Germany | UJZK01000001.1 | EuSCAPE_DE060 | 11 | 1 | 5 | 41 | 53 | 1 | 6 |
136 | Human | Blood | KPC-2 | Germany | UJZM01000001.1 | EuSCAPE_DE073 | 11 | 36 | 6 | 1 | 1 | 6 | 2 |
137 | Human | Lower Respiratory Tract Secrection | negative | Germany | UJZL01000001.1 | EuSCAPE_DE087 | 9 | 24 | 16 | 50 | 1 | 13 | 2 |
138 | Human | Blood | negative | Denmark | UJZZ01000001.1 | EuSCAPE_DK012 | 45 | 37 | 25 | 8 | 11 | 23 | 13 |
139 | Human | Wound Secretion | negative | Estonia | UJZB01000001.1 | EuSCAPE_EE016 | 1 | 6 | 18 | 29 | 1 | 7 | 4 |
140 | Human | Puncture Fluids | SHV-1 (not ESBL) | Spain | UJZX01000001.1 | EuSCAPE_ES230 | 11 | 27 | 2 | 51 | 53 | 4 | 2 |
141 | Human | Blood | negative | Francia | UJZD01000001.1 | EuSCAPE_FR080 | 1 | 4 | 5 | 1 | 15 | 1 | 14 |
142 | Human | Lower Respiratory Tract Secrection | negative | Croatia | UKAG01000001.1 | EuSCAPE_HR006 | 9 | 17 | 13 | 3 | 7 | 1 | 4 |
143 | Human | Lower Respiratory Tract Secrection | negative | Croatia | UKAR01000001.1 | EuSCAPE_HR033 | 11 | 24 | 18 | 52 | 54 | 3 | 2 |
144 | Human | Blood | negative | Hungary | UJZW01000001.1 | EuSCAPE_HU040 | 1 | 3 | 6 | 8 | 11 | 1 | 2 |
144 | Human | Urine | negative | Portugal | UKAH01000001.1 | EuSCAPE_PT061 | 1 | 3 | 6 | 8 | 11 | 1 | 2 |
145 | Human | Blood | negative | Ireland | UKAL01000001.1 | EuSCAPE_IE014 | 1 | 10 | 6 | 25 | 11 | 13 | 6 |
146 | Human | Blood | negative | Ireland | UKAZ01000001.1 | EuSCAPE_IE021 | 1 | 4 | 5 | 2 | 9 | 1 | 2 |
146 | Human | Blood | negative | United Kingdom | UKAE01000001.1 | EuSCAPE_UK107 | 1 | 4 | 5 | 2 | 9 | 1 | 2 |
147 | Human | Blood | negative | Israel | UJZN01000001.1 | EuSCAPE_IL071 | 11 | 28 | 6 | 43 | 55 | 13 | 2 |
148 | Human | Urine | negative | Italy | UJZV01000001.1 | EuSCAPE_IT091 | 28 | 3 | 5 | 53 | 1 | 1 | 2 |
149 | Human | Lower Respiratory Tract Secrection | negative | Italy | UJZP01000001.1 | EuSCAPE_IT159 | 5 | 38 | 5 | 44 | 46 | 13 | 2 |
150 | Human | Urine | negative | Italy | UJZR01000001.1 | EuSCAPE_IT191 | 1 | 17 | 14 | 10 | 39 | 1 | 4 |
151 | Human | Blood | negative | Italy | UJZO01000001.1 | EuSCAPE_IT251 | 1 | 18 | 12 | 1 | 56 | 1 | 2 |
152 | Human | Blood | negative | Italy | UKAC01000001.1 | EuSCAPE_IT309 | 2 | 39 | 1 | 12 | 1 | 2 | 4 |
153 | Human | Urine | negative | Italy | UJZT01000001.1 | EuSCAPE_IT344 | 1 | 18 | 12 | 1 | 1 | 10 | 2 |
154 | Human | Urine | negative | Italy | UJZS01000001.1 | EuSCAPE_IT389 | 1 | 3 | 6 | 12 | 3 | 24 | 15 |
155 | Human | Urine | negative | Norway | UJZH01000001.1 | EuSCAPE_NO020 | 9 | 40 | 1 | 54 | 57 | 1 | 5 |
156 | Human | Urine | negative | Poland | UJZC01000001.1 | EuSCAPE_PL033 | 46 | 28 | 16 | 38 | 58 | 16 | 4 |
157 | Human | Urine | negative | Portugal | UKAA01000001.1 | EuSCAPE_PT077 | 47 | 41 | 1 | 13 | 13 | 1 | 5 |
158 | Human | Puncture Fluids | SHV-1 (not ESBL) | Romania | UKAJ01000001.1 | EuSCAPE_RO063 | 11 | 5 | 12 | 1 | 59 | 4 | 2 |
159 | Human | Pus | negative | Romania | UKAK01000001.1 | EuSCAPE_RO090 | 2 | 4 | 3 | 38 | 4 | 18 | 4 |
160 | Human | Blood | SHV-12, OXA-9 | Serbia | UKAO01000001.1 | EuSCAPE_RS096 | 1 | 18 | 3 | 1 | 1 | 13 | 2 |
161 | Human | Puncture Fluids | OXA-1 (not ESBL) | Slovenia | UKAB01000001.1 | EuSCAPE_SI005 | 31 | 42 | 26 | 20 | 1 | 25 | 4 |
162 | Human | Urine | negative | Slovenia | UKAD01000001.1 | EuSCAPE_SI024 | 38 | 24 | 6 | 1 | 35 | 1 | 10 |
163 | Human | Urine | negative | Turkey | UKAS01000001.1 | EuSCAPE_TR218 | 13 | 1 | 6 | 1 | 1 | 13 | 4 |
164 | Human | Urine | CTX-M-3 | Turkey | UKAU01000001.1 | EuSCAPE_TR259 | 1 | 6 | 5 | 1 | 32 | 1 | 2 |
165 | Human | Urine | negative | United Kingdom | UKAF01000001.1 | EuSCAPE_UK089 | 16 | 1 | 5 | 41 | 34 | 1 | 6 |
166 | Human | Urine | negative | United Kingdom | UKAI01000001.1 | EuSCAPE_UK124 | 48 | 4 | 3 | 1 | 60 | 4 | 2 |
167 | Animal (migratory bird) | unknown | unknown | Brazil | in process | M50 | 1 | 36 | 12 | 1 | 1 | 1 | 2 |
168 | Human | Catheter | unknown | Brazil | GCA_012274355.1 | Kv57 | 19 | 24 | 1 | 1 | 1 | 1 | 2 |
169 | Human | unknown | negative | Brazil | in process | 18L | 49 | 4 | 6 | 1 | 36 | 1 | 2 |
170 | Human | Urine | negative | Brazil | GCA_012274425.1 | Kv15 | 50 | 3 | 5 | 20 | 35 | 4 | 2 |
171 | Human | Blood | negative | Brazil | GCA_012274365.1 | Kv35 | 11 | 43 | 6 | 1 | 35 | 1 | 2 |
172 | Human | Urine | unknown | Brazil | GCA_012274385.1 | Kv97 | 18 | 20 | 1 | 55 | 11 | 1 | 4 |
172 | Human | Blood | unknown | Brazil | GCA_012274345.1 | Kv104 | 18 | 20 | 1 | 55 | 11 | 1 | 4 |
173 | Human | Catheter | SHV-12 | Chile | VSSZ00000000.1 | UCO-495 | 10 | 9 | 6 | 1 | 11 | 1 | 2 |
174 | Animal | Liver | Negative | China | CP047360 | AHKv-S01 | 19 | 6 | 5 | 1 | 5 | 7 | 4 |
175 | River | Water | blaCTX-M-15, blaTEM-1B, blaLEN16 | Brazil | Under submission (In process) | SQ91 | 51 | 6 | 27 | 56 | 61 | 1 | 4 |
176 | Food | Soybean sprout | blaCTX-M-14 | Switzerland | CP067261-CP067264 | E25 | 1 | 3 | 12 | 12 | 3 | 1 | 2 |
177 | Human | Missing | Negative | Missing | NZ_LR130544.1 | 03-311-0071 | 52 | 39 | 5 | 57 | 1 | 13 | 4 |
61 | Human | Missing | Negative | Missing | NZ_LR130543.1 | 04153260899A | 1 | 9 | 6 | 1 | 13 | 1 | 6 |
178 | Environment | Missing | Negative | Switzerland | CP048379.1 | 118 | 53 | 22 | 20 | 49 | 62 | 17 | 7 |
132 | Human | Missing | Negative | China | NZ_CP032354.1 | 15WZ-82 | 28 | 30 | 3 | 37 | 1 | 1 | 2 |
10 | Human | pure culture | KPC-3 | France | VUCX00000000.1 | 171J7 | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
33 | Human | Missing | Negative | Missing | CDQZ00000000.1 | 1f2B | 15 | 6 | 15 | 1 | 22 | 1 | 2 |
142 | Human | Culture | SFO-1/IMP-4/OXA-1 (not ESBL) | China | RXMC00000000.1 | 20118 | 9 | 17 | 13 | 3 | 7 | 1 | 4 |
179 | Human | Missing | Negative | United Kingdom | UNYJ00000000.1 | 2485STDY5438211 | 11 | 4 | 6 | 58 | 63 | 2 | 2 |
180 | Human | Missing | Negative | United Kingdom | UNYV00000000.1 | 2485STDY5438212 | 54 | 20 | 6 | 59 | 5 | 1 | 2 |
181 | Human | Missing | Negative | United Kingdom | UOBV00000000.1 | 2485STDY5438376 | 1 | 10 | 1 | 15 | 64 | 14 | 6 |
88 | Human | Missing | Negative | United Kingdom | UODS00000000.1 | 2485STDY5438395 | 2 | 1 | 3 | 38 | 4 | 18 | 6 |
114 | Human | Missing | Negative | United Kingdom | UOCJ00000000.1 | 2485STDY5477939 | 1 | 28 | 6 | 43 | 49 | 13 | 2 |
181 | Human | Missing | Negative | United Kingdom | UOCE00000000.1 | 2485STDY5477945 | 1 | 10 | 1 | 15 | 64 | 14 | 6 |
182 | Human | Missing | Negative | United Kingdom | UODE00000000.1 | 2485STDY5477978 | 1 | 10 | 1 | 15 | 1 | 14 | 6 |
33 | Human | Missing | Negative | Missing | NZ_CDPS01000072.1 | 2b2A | 15 | 6 | 15 | 1 | 22 | 1 | 2 |
183 | Human | Culture | IMP-4 | China | RXMR00000000.1 | 4095 | 1 | 3 | 12 | 1 | 11 | 1 | 2 |
184 | Human | Missing | Negative | Thailand | UFGF00000000.1 | 4300STDY6470483 | 55 | 24 | 6 | 2 | 65 | 1 | 2 |
185 | Human | Feces | Negative | United Kingdom | CABGVU000000000.1 | 4928STDY7071124 | 23 | 44 | 5 | 1 | 34 | 1 | 2 |
186 | Human | Feces | Negative | United Kingdom | CABHBZ000000000.1 | 4928STDY7387670 | 56 | 24 | 16 | 60 | 34 | 3 | 4 |
187 | Human | Feces | Negative | United Kingdom | CABHDK000000000.1 | 4928STDY7387724 | 1 | 19 | 12 | 1 | 1 | 10 | 2 |
188 | Human | Feces | Negative | United Kingdom | NZ_LR607362.1 | 4928STDY7387736 | 19 | 5 | 5 | 2 | 10 | 1 | 2 |
185 | Human | Feces | Negative | United Kingdom | LR607358.1 | 4928STDY7387758 | 23 | 44 | 5 | 1 | 34 | 1 | 2 |
189 | Human | Feces | Negative | United Kingdom | CABHFR000000000.1 | 4928STDY7387791 | 1 | 4 | 5 | 43 | 66 | 14 | 2 |
185 | Human | Feces | Negative | United Kingdom | NZ_CABHJP010000001.1 | 4928STDY7387946 | 23 | 44 | 5 | 1 | 34 | 1 | 2 |
188 | Human | Feces | Negative | United Kingdom | CABHJJ000000000.1 | 4928STDY7387950 | 19 | 5 | 5 | 2 | 10 | 1 | 2 |
190 | unknown | unknown | Negative | unknown | CAAGTB000000000.1 | 5012STDY7312721 | 57 | 4 | 6 | 1 | 1 | 1 | 2 |
191 | unknown | unknown | Negative | unknown | CAAGUK000000000.1 | 5012STDY7312728 | 57 | 4 | 6 | 25 | 1 | 1 | 2 |
192 | unknown | unknown | Negative | unknown | CAAGUP000000000.1 | 5012STDY7312732 | 1 | 27 | 6 | 1 | 67 | 1 | 2 |
193 | Human | Urine | OXA-48 | Norway | NZ_LNIR01000086.1 | 50878013 | 58 | 45 | 6 | 25 | 35 | 13 | 6 |
194 | Human | Feces | NDM-1 | Romania | PEHS00000000.1 | 6TM | 1 | 46 | 28 | 1 | 11 | 1 | 2 |
69 | Human | Culture | OXA-1 (not ESBL)/IMP-4 | China | RXMP00000000.1 | 7041 | 25 | 21 | 3 | 35 | 35 | 1 | 2 |
195 | Animal | Milk - cow | Negative | USA | PIDP00000000.1 | A8 | 31 | 6 | 5 | 8 | 1 | 1 | 4 |
56 | Human | Urine | Negative | Australia | NZ_LR130539.1 | AJ055 | 21 | 18 | 3 | 2 | 1 | 13 | 2 |
196 | Human | Lung | Negative | USA | VKXX00000000.1 | AS012291 | 22 | 6 | 1 | 20 | 68 | 26 | 5 |
101 | Human | Lung | Negative | USA | WFGU00000000.1 | AS012294 | 2 | 5 | 6 | 3 | 5 | 1 | 2 |
197 | Human | Lung | Negative | USA | VKXJ00000000.1 | AS012311 | 1 | 6 | 3 | 2 | 3 | 1 | 3 |
198 | Human | Lung | Negative | USA | VKVS00000000.1 | AS012372 | 24 | 3 | 1 | 32 | 33 | 1 | 4 |
94 | Human | Lung | Negative | USA | VKUS00000000.1 | AS012406 | 34 | 6 | 6 | 1 | 35 | 1 | 4 |
199 | Human | Lung | Negative | USA | VKTV00000000.1 | AS012432 | 1 | 3 | 6 | 12 | 11 | 1 | 2 |
200 | Human | Lung | Negative | USA | VKTF00000000.1 | AS012453 | 12 | 19 | 13 | 1 | 1 | 1 | 4 |
201 | unknown | unknown | Negative | unknown | CDRB00000000.1 | B8C2 | 4 | 20 | 6 | 2 | 10 | 1 | 4 |
60 | Human | Blood | Negative | Bangladesh | PJQN00000000.1 | BD_DM_07 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15/ OXA-1(not ESBL) | Bangladesh | QTZZ00000000.1 | BD_DM_405b | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | OXA-1 (not ESBL)/CTX-M-15 | Bangladesh | PJQO00000000.1 | BD_DM_414 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
202 | Human | Rectal swab | Negative | Tanzania | JAAFAQ000000000.1 | BS68R-1-A | 1 | 47 | 12 | 22 | 52 | 1 | 4 |
42 | unknown | Cell culture | Negative | unknown | LBCM00000000.1 | CICC10011 | 18 | 6 | 4 | 1 | 1 | 6 | 2 |
203 | Human | Missing | SHV-12 | Colombia | NCMP00000000.1 | COL-Kpn36 | 59 | 32 | 29 | 61 | 69 | 27 | 4 |
14 | Human | Missing | NDM-5 | USA | JABKRN000000000.1 | CRE 135 | 7 | 3 | 6 | 8 | 12 | 4 | 3 |
204 | Human | Missing | OXA-1(not ESBL)/CTX-M-15 | USA | JABKRM000000000.1 | CRE 165 | 60 | 39 | 6 | 33 | 39 | 13 | 4 |
204 | Human | Missing | OXA-1(not ESBL)/CTX-M-16 | USA | JABKRL000000000.1 | CRE 180 | 60 | 39 | 6 | 33 | 39 | 13 | 4 |
205 | Human | Missing | KPC-31 | USA | JABKRK000000000.1 | CRE 184 | 1 | 20 | 1 | 1 | 70 | 16 | 6 |
53 | Human | Miscellaneous body fluid | KPC-2 | USA | PTGT00000000.2 | CRK0383 | 1 | 21 | 1 | 25 | 30 | 11 | 4 |
206 | Animal | rumen fluid (camel) | Negative | India | JABRVG000000000.1 | CRN 15 | 61 | 24 | 5 | 3 | 61 | 1 | 5 |
207 | Animal | rumen fluid (camel) | Negative | India | JABRVJ000000000.1 | CRN 19 | 14 | 24 | 6 | 44 | 13 | 3 | 2 |
136 | Human | Blood | KPC-2 | Germany | UJZM01000001.1 | EuSCAPE_DE073 | 11 | 36 | 6 | 1 | 1 | 6 | 2 |
208 | unknown | Missing | Negative | unknown | VHID00000000.1 | F10CI | 1 | 10 | 1 | 10 | 1 | 1 | 2 |
209 | Human | Clinical isolate | Negative | USA | JAAXYY000000000.1 | FDAARGOS_625 | 2 | 48 | 6 | 50 | 1 | 6 | 2 |
210 | Human | Clinical isolate | Negative | USA | NZ_CP044049.1 | FDAARGOS_627 | 22 | 6 | 5 | 13 | 44 | 1 | 4 |
211 | Human | Missing | Negative | USA | CP050958.1 | FDAARGOS_628 | 1 | 3 | 12 | 12 | 71 | 1 | 2 |
212 | Environment | Soil | Negative | China | CP054254.1 | FH-1 | 1 | 19 | 30 | 12 | 72 | 1 | 4 |
213 | Plant | Plantain | Negative | Haiti | WNLK00000000.1 | G18-1365 | 11 | 4 | 10 | 1 | 34 | 1 | 10 |
213 | Plant | Plantain | Negative | Haiti | WNLL00000000.1 | G18-1376 | 11 | 4 | 10 | 1 | 34 | 1 | 10 |
214 | Plant | Cenchrus macrourus | Negative | China | CP031061.1 | GN02 | 11 | 28 | 5 | 12 | 9 | 2 | 2 |
215 | Animal | Forrest musk deer | Negative | China | NZ_LNIR00000000.1 | GPKP | 62 | 10 | 1 | 29 | 1 | 1 | 4 |
216 | Environment | Activated sludge | Negative | China | VJZH00000000.1 | Glu3 | 10 | 49 | 12 | 44 | 11 | 4 | 2 |
217 | Human | Missing | Negative | China | JACNNG000000000.1 | K022 | 28 | 6 | 5 | 37 | 1 | 1 | 2 |
68 | Human | Missing | Negative | China | JACNOL000000000.1 | K088 | 1 | 18 | 6 | 1 | 34 | 13 | 2 |
218 | Human | Blood | OXA-9/SHV-12 | United Kingdom | NZ_FLJK00000000.1 | K1670 | 19 | 5 | 6 | 1 | 1 | 1 | 2 |
219 | Plant | Alfalfa sprouts | Negative | Germany | VTUK00000000.1 | K2 | 1 | 3 | 6 | 12 | 11 | 13 | 2 |
220 | Human | Blood | OXA-48 | United Kingdom | NZ_FLDD00000000.1 | K379 | 1 | 27 | 2 | 24 | 73 | 1 | 4 |
221 | Human | Blood | CTX-M-9 | Brazil | RCHX00000000.1 | K5-12018 | 44 | 50 | 31 | 62 | 74 | 17 | 16 |
222 | Human | Missing | CTX-M-15 | China | JACNQQ000000000.1 | K7043 | 1 | 1 | 1 | 1 | 11 | 1 | 1 |
16 | Human | Missing | Negative | China | JACNRD000000000.1 | K7063 | 9 | 3 | 12 | 8 | 3 | 5 | 2 |
132 | Human | Missing | CTXM-14/LAP-2 | China | JACNRV000000000.1 | K7089 | 28 | 30 | 3 | 37 | 1 | 1 | 2 |
223 | Human | Missing | OXA-1 (not ESBL)/LAP-2 | China | JACNTB000000000.1 | K7132 | 1 | 51 | 5 | 2 | 75 | 1 | 6 |
224 | Human | Missing | CTX-M-99/DHA-1/CTXM-122/CTXM-65/CTXM-196/CTX-M-125/CTX-M-14/ | China | JACNVK000000000.1 | K824 | 63 | 52 | 6 | 32 | 1 | 1 | 2 |
225 | Human | Not collected | CTX-M-15 | China | JACJGZ000000000.1 | K915 | 11 | 27 | 2 | 8 | 45 | 28 | 2 |
115 | Human | Missing | Negative | China | CP060807.1 | KP2757 | 11 | 23 | 6 | 1 | 35 | 1 | 10 |
226 | Human | Clinical material | TEM-135/TEM-106/TEM-126 | South Africa | CACRXS000000000.1 | Kpn01734 | 1 | 53 | 5 | 32 | 9 | 1 | 4 |
227 | unknown | unknown | VIM-1 | unknown | CACSDT000000000.1 | Kpngiani7132485 | 11 | 44 | 6 | 51 | 34 | 13 | 2 |
228 | Human | Urinary tract infection | LEN-16 | USA | JACJGZ000000000.1 | LEMB11 | 1 | 9 | 1 | 8 | 11 | 1 | 2 |
137 | Animal | Choanal swab (Dendrocygna viduata) | Negative | Brazil | JAAGEJ000000000.1 | M14 | 9 | 24 | 16 | 50 | 1 | 13 | 2 |
137 | Animal | Choanal swab (Dendrocygna viduata) | Negative | Brazil | JAAGEK000000000.1 | M15 | 9 | 24 | 16 | 50 | 1 | 13 | 2 |
229 | Animal | Pork from retail store | Negative | China | JAALEX000000000.1 | M-20-X3 | 58 | 1 | 12 | 8 | 1 | 1 | 2 |
229 | Animal | Pork from retail store | Negative | China | JAALFA000000000.1 | M-20 | 58 | 1 | 12 | 8 | 1 | 1 | 2 |
54 | Human | Feces | Negative | unknown | CAAKOL000000000.1 | MC1 | 1 | 5 | 5 | 1 | 1 | 1 | 2 |
230 | Plant | Salacia chinensis | Negative | India | CAJCKQ000000000.1 | ME73 | 16 | 1 | 5 | 1 | 76 | 1 | 6 |
230 | Plant | Madhuca insignis | Negative | India | CAJCKL000000000.1 | ME79 | 16 | 1 | 5 | 1 | 76 | 1 | 6 |
123 | Human | Bile (fluid) | Negative | USA | NZ_KK737658.1 | MGH76 | 1 | 3 | 12 | 1 | 1 | 10 | 2 |
231 | Human | Gut | Negative | Australia | CABMNH000000000.1 | MGYG-HGUT-02511 | 11 | 5 | 14 | 25 | 1 | 13 | 6 |
199 | Human | Stool | Negative | USA | QYMI00000000.1 | N015.H-29 | 1 | 3 | 6 | 12 | 11 | 1 | 2 |
10 | Human | Stool | Negative | USA | RHFL00000000.1 | N041.A-12 | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
232 | unknown | Missing | Negative | unknown | UGND00000000.1 | NCTC10262 | 64 | 10 | 2 | 25 | 1 | 13 | 2 |
233 | unknown | Missing | Negative | unknown | UGLX00000000.1 | NCTC11695 | 65 | 12 | 5 | 15 | 15 | 1 | 4 |
234 | unknown | Urine | Negative | unknown | NZ_CABDWI010000002.1 | NCTC9169 | 66 | 1 | 12 | 1 | 77 | 1 | 2 |
120 | unknown | Missing | Negative | unknown | NZ_LR134235.1 | NCTC9668 | 35 | 27 | 6 | 3 | 1 | 13 | 6 |
235 | Animal | gut- Mus musculus | Negative | Canada | SSTO00000000.1 | NM43_TS4-1 | 11 | 54 | 5 | 1 | 11 | 1 | 6 |
236 | unknown | Grower Feed | Negative | USA | VFLS00000000.1 | PF-1 | 67 | 3 | 6 | 8 | 11 | 1 | 2 |
236 | unknown | Grower Feed | Negative | USA | VFLW00000000.1 | PF-5 | 67 | 3 | 6 | 8 | 11 | 1 | 2 |
237 | Environment | Freshwater biome | Negative | United Kingdom | CP056145.1 | RHBSTW-00883 | 11 | 12 | 5 | 15 | 15 | 1 | 2 |
218 | unknown | Missing | Negative | unknown | CAAHFX000000000.1 | SB1 | 19 | 5 | 6 | 1 | 1 | 1 | 2 |
89 | unknown | Missing | Negative | unknown | USZY00000000.1 | SB3295 | 1 | 17 | 1 | 25 | 42 | 1 | 4 |
68 | unknown | Missing | Negative | unknown | USZZ00000000.1 | SB3301 | 1 | 18 | 6 | 1 | 34 | 13 | 2 |
238 | unknown | Missing | Negative | unknown | UTAB00000000.1 | SB497 | 1 | 6 | 6 | 63 | 32 | 1 | 2 |
239 | unknown | Missing | Negative | unknown | CAAHGL000000000.1 | SB5387 | 53 | 55 | 20 | 64 | 78 | 17 | 7 |
240 | unknown | Missing | Negative | unknown | CAAHGM000000000.1 | SB5439 | 30 | 25 | 32 | 65 | 79 | 29 | 4 |
241 | unknown | Missing | Negative | unknown | CAAHGN000000000.1 | SB5531 | 30 | 25 | 32 | 39 | 80 | 17 | 4 |
242 | unknown | Missing | Negative | unknown | CAAHGO000000000.1 | SB5544 | 30 | 56 | 21 | 66 | 81 | 17 | 4 |
243 | unknown | Missing | Negative | unknown | CAAHGP000000000.1 | SB5610 | 68 | 57 | 33 | 67 | 82 | 17 | 7 |
146 | Human | Missing | CTX-M-15 | South Africa Durban | NZ_LJEQ00000000.1 | ST1478:939997103 | 1 | 4 | 5 | 2 | 9 | 1 | 2 |
32 | Human | Rectal swab | OXA-1 (not ESBL)/KPC-2/CTX-M-15 | Brazil | SZND00000000.1 | ST681 | 14 | 16 | 14 | 15 | 21 | 7 | 2 |
244 | Human | Missing | Negative | Japan | BIGL00000000.1 | TUM14006 | 16 | 1 | 2 | 41 | 53 | 13 | 6 |
244 | Human | Missing | Negative | Japan | BIGM00000000.1 | TUM14007 | 16 | 1 | 2 | 41 | 53 | 13 | 6 |
16 | Human | Missing | Negative | Japan | BIGP00000000.1 | TUM14010 | 9 | 3 | 12 | 8 | 3 | 5 | 2 |
98 | Human | Missing | Negative | Japan | BIGQ00000000.1 | TUM14011 | 28 | 30 | 5 | 37 | 1 | 1 | 2 |
98 | Human | Missing | Negative | Japan | BIGR00000000.1 | TUM14012 | 28 | 30 | 5 | 37 | 1 | 1 | 2 |
245 | Human | Missing | Negative | Japan | BIHA00000000.1 | TUM14021 | 11 | 27 | 12 | 68 | 1 | 7 | 2 |
246 | Human | Missing | Negative | Japan | BIHE00000000.1 | TUM14025 | 1 | 3 | 6 | 8 | 11 | 1 | 17 |
247 | Human | Missing | Negative | Japan | BIHH00000000.1 | TUM14028 | 69 | 1 | 1 | 1 | 11 | 1 | 1 |
248 | Human | Missing | Negative | Japan | BIHM00000000.1 | TUM14033 | 19 | 24 | 5 | 6 | 5 | 7 | 2 |
249 | Human | Missing | Negative | Japan | BIHO00000000.1 | TUM14035 | 1 | 58 | 1 | 2 | 83 | 13 | 6 |
113 | Human | Missing | Negative | Japan | BIHQ00000000.1 | TUM14037 | 14 | 1 | 6 | 1 | 36 | 1 | 2 |
250 | Human | Missing | Negative | Japan | BIIL00000000.1 | TUM14058 | 1 | 59 | 1 | 69 | 37 | 11 | 10 |
251 | Human | Missing | Negative | Japan | BIJE00000000.1 | TUM14077 | 70 | 5 | 6 | 3 | 5 | 1 | 2 |
252 | Human | Missing | Negative | Japan | BIJF00000000.1 | TUM14078 | 2 | 39 | 6 | 9 | 55 | 1 | 18 |
253 | Human | Missing | Negative | Japan | BIJG00000000.1 | TUM14079 | 71 | 4 | 34 | 70 | 1 | 1 | 5 |
222 | Human | Missing | Negative | Japan | BIJM00000000.1 | TUM14085 | 1 | 1 | 1 | 1 | 11 | 1 | 1 |
254 | Human | Missing | Negative | Japan | BIJN00000000.1 | TUM14086 | 72 | 27 | 3 | 55 | 84 | 1 | 4 |
1 | Human | Missing | Negative | Japan | BIJW00000000.1 | TUM14095 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
61 | Human | Missing | Negative | Japan | BIJX00000000.1 | TUM14096 | 1 | 9 | 6 | 1 | 13 | 1 | 6 |
92 | Human | Missing | Negative | Japan | BIKC00000000.1 | TUM14103 | 1 | 6 | 23 | 43 | 1 | 1 | 4 |
255 | Human | Missing | Negative | Japan | BIKI00000000.1 | TUM14109 | 57 | 60 | 13 | 1 | 1 | 1 | 2 |
256 | Human | Missing | Negative | Japan | BIKO00000000.1 | TUM14115 | 1 | 19 | 12 | 68 | 3 | 1 | 2 |
257 | Human | Missing | Negative | Japan | BILJ00000000.1 | TUM14136 | 11 | 61 | 5 | 44 | 35 | 3 | 4 |
61 | Animal | Bos indicus - urine | Negative | Brazil | JAAVMD000000000.1 | UFMG-H10 | 1 | 9 | 6 | 1 | 13 | 1 | 6 |
61 | Animal | Bos indicus - urine | Negative | Brazil | JAAVME000000000.1 | UFMG-H9 | 1 | 9 | 6 | 1 | 13 | 1 | 6 |
181 | Environment | Sewage | Negative | United Kingdom | NZ_FWHD00000000.1 | VRCO0019 | 1 | 10 | 1 | 15 | 64 | 14 | 6 |
258 | Human | Sewage | Negative | United Kingdom | NZ_FWGT00000000.1 | VRCO0021 | 9 | 62 | 6 | 35 | 85 | 30 | 19 |
199 | Environment | Sewage | Negative | United Kingdom | NZ_FWWJ00000000.1 | VRCO0037 | 1 | 3 | 6 | 12 | 11 | 1 | 2 |
259 | Environment | Sewage | Negative | United Kingdom | NZ_FWGF00000000.1 | VRCO0145 | 1 | 24 | 3 | 44 | 13 | 3 | 2 |
19 | Environment | Sewage | Negative | United Kingdom | NZ_FWOH00000000.1 | VRCO0179 | 1 | 4 | 1 | 1 | 11 | 1 | 2 |
260 | Human | Feces | Negative | United Kingdom | NZ_FWOP00000000.1 | VRCO0242 | 1 | 10 | 14 | 42 | 86 | 13 | 6 |
260 | Human | Feces | Negative | United Kingdom | NZ_FWOX00000000.1 | VRCO0243 | 1 | 10 | 14 | 42 | 86 | 13 | 6 |
260 | Human | Feces | Negative | United Kingdom | NZ_FWLD00000000.1 | VRCO0244 | 1 | 10 | 14 | 42 | 86 | 13 | 6 |
260 | Human | Feces | Negative | United Kingdom | NZ_FWLG00000000.1 | VRCO0246 | 1 | 10 | 14 | 42 | 86 | 13 | 6 |
261 | Human | Feces | Negative | United Kingdom | NZ_FWPE00000000.1 | VRCO0296 | 11 | 1 | 3 | 71 | 87 | 1 | 4 |
261 | Human | Feces | Negative | United Kingdom | NZ_FWPH00000000.1 | VRCO0298 | 11 | 1 | 3 | 71 | 87 | 1 | 4 |
261 | Human | Feces | Negative | United Kingdom | NZ_FWMH00000000.1 | VRCO0299 | 11 | 1 | 3 | 71 | 87 | 1 | 4 |
261 | Human | Feces | Negative | United Kingdom | NZ_FWPI00000000.1 | VRCO0300 | 11 | 1 | 3 | 71 | 87 | 1 | 4 |
10 | Human | Feces | Negative | United Kingdom | NZ_FWMT00000000.1 | VRCO0375 | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
10 | Human | Feces | Negative | United Kingdom | NZ_FWMV00000000.1 | VRCO0376 | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
68 | Human | Blood | Negative | United Kingdom | NZ_FWOA00000000.1 | VRCO0486 | 1 | 18 | 6 | 1 | 34 | 13 | 2 |
262 | Human | Urine | Negative | USA | QIYR00000000.1 | WUSM_KV_05 | 1 | 28 | 2 | 29 | 9 | 2 | 4 |
263 | Human | Urine | Negative | USA | QIXO00000000.1 | WUSM_KV_34 | 6 | 39 | 16 | 61 | 11 | 1 | 6 |
264 | Human | Urine | Negative | USA | QIXG00000000.1 | WUSM_KV_42 | 73 | 4 | 6 | 24 | 4 | 21 | 2 |
20 | Human | Urine | Negative | USA | QIXB00000000.1 | WUSM_KV_47 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
265 | Animal | mice gut | CTX-M-15 | China | JAAGKT000000000.1 | Z5 | 16 | 1 | 5 | 41 | 88 | 1 | 6 |
266 | Human | Missing | Negative | China | CABWVW000000000.1 | ZKP147 | 18 | 4 | 5 | 1 | 89 | 1 | 2 |
267 | Human | Missing | Negative | China | CABWWV000000000.1 | ZKP176 | 1 | 3 | 12 | 1 | 1 | 1 | 2 |
101 | Human | Missing | Negative | China | CABWXA000000000.1 | ZKP186 | 2 | 5 | 6 | 3 | 5 | 1 | 2 |
268 | Human | Missing | Negative | China | CABWWN000000000.1 | ZKP4 | 1 | 63 | 7 | 2 | 90 | 1 | 2 |
269 | Human | Missing | Negative | China | CABWWO000000000.1 | ZKP7 | 1 | 19 | 6 | 20 | 52 | 1 | 2 |
187 | Human | Missing | Negative | China | CABWUC000000000.1 | ZKP74 | 1 | 19 | 12 | 1 | 1 | 10 | 2 |
270 | Human | Blood | SHV-12/OXA-9/TEM-29/TEM-122/TEM-141/TEM-55/TEM-135/TEM-57 | United Kingdom | NZ_FLHG00000000.1 | k1148 | 42 | 3 | 3 | 29 | 1 | 7 | 12 |
108 | Human | Blood | SHV-12/CTX-M-9 | United Kingdom | NZ_FLBS00000000.1 | k1154 | 38 | 33 | 24 | 45 | 47 | 1 | 6 |
271 | Human | Blood | Negative | United Kingdom | NZ_FLBY00000000.1 | k1309 | 1 | 4 | 3 | 1 | 11 | 1 | 2 |
270 | Human | Blood | Negative | United Kingdom | NZ_FLBV00000000.1 | k1527 | 42 | 3 | 3 | 29 | 1 | 7 | 12 |
272 | Animal | Milk from dairy animals with mastitis (culture) | Negative | Canada | NZ_FLEC00000000.1 | k305 | 1 | 4 | 35 | 20 | 1 | 1 | 20 |
273 | Human | Blood | Negative | United Kingdom | NZ_FLDE00000000.1 | k336 | 11 | 64 | 2 | 8 | 3 | 1 | 2 |
274 | Human | Blood | TEM-141/TEM-57/TEM-55/TEM-135/SHV-12/OXA-9/TEM-122/TEM-29 | United Kingdom | NZ_FLDI00000000.1 | k385 | 23 | 44 | 36 | 1 | 34 | 1 | 2 |
275 | Human | Blood | Negative | United Kingdom | NZ_FLEA00000000.1 | k841 | 9 | 4 | 3 | 72 | 91 | 1 | 6 |
20 | Human | Blood | OXA-9/SHV-12 | United Kingdom | NZ_FLER00000000.1 | k911 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
271 | Human | Blood | OXA-9/ SHV-12 | United Kingdom | NZ_FLES00000000.1 | k913 | 1 | 4 | 3 | 1 | 11 | 1 | 2 |
10 | Human | Blood | SHV-12/ OXA-9 | United Kingdom | NZ_FLIQ00000000.1 | k916 | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
276 | Human | Blood | SHV-12 | United Kingdom | NZ_FLET00000000.1 | k967 | 74 | 28 | 5 | 2 | 15 | 7 | 2 |
20 | unknown | Missing | CTX-M-15/OXA-1 (not ESBL) | unknown | CABEGD000000000.1 | k_variicola_1 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | unknown | Missing | CTX-M-15 | unknown | CABEGE000000000.1 | k_variicola_2 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | unknown | Missing | CTX-M-15 | unknown | CABEGJ000000000.1 | k_variicola_3 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | unknown | Missing | CTX-M-15 | unknown | CABEGF000000000.1 | k_variicola_4 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | unknown | Missing | CTX-M-15 | unknown | CABEGG000000000.1 | k_variicola_5 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | unknown | Missing | CTX-M-15 | unknown | CABEGI000000000.1 | k_variicola_6 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
8 | Human | Missing | Negative | China | CABWWV000000000.1 | ZKP103 | 1 | 6 | 8 | 5 | 7 | 1 | 5 |
277 | Human | Missing | NDM-1 | Switzerland | UWVP00000000.1 | kpneu010 | 31 | 27 | 2 | 33 | 58 | 1 | 2 |
3 | Plant | Maize shoots | Negative | unknown | CXOY00000000.1 | 3 | 1 | 3 | 3 | 2 | 3 | 1 | 3 |
278 | Human | Community-acquired infection | LEN-9 | Brazil | in process | 58243 | 1 | 21 | 1 | 25 | 1 | 11 | 21 |