Error: check digit format.
ST | |
---|---|
Origin | |
Sample | |
ESBL/Carbapenemase | |
Country | |
Strain |
No match with ST profile.
Error: check fasta format.
ANIm | K.variicola | K.quasivariicola | K.pneumoanie | K.quasipneumoniae |
---|---|---|---|---|
Query |
Allele | Profile | Identity (%) | Overlap (%) | Positions | Hit |
---|
Error: check dna format.
Allele | Profile | Identity (%) | Overlap (%) | Positions |
---|---|---|---|---|
Differences | ||||
Number | query () | database |
Database developed by the Centro de Investigación Sobre Enfermedades Infecciosas (CISEI)
in collaboration with the Centro de Ciencias Genómicas (CCG-UNAM). This site has been
funded by the Instituto Nacional de Salud Pública (INSP).
Reference for citations
of MLST of K. variicola:
Barrios-Camacho Humberto, Aguilar-Vera Alejandro,
Beltran-Rojel Marilu, Aguilar-Vera Edgar, Duran-Bedolla Josefina, Rodriguez-Medina Nadia,
Lozano Aguirre Luis, Perez-Carrascal Olga Maria, Rojas Jesús, and Garza-Ramos Ulises.
Molecular epidemiology of Klebsiella variicola obtained from different sources.
Scientific Reports. 2019. 9:10610.
Download
leuS | (Leucyl-tRNA synthethase) |
pgi | (Phosphoglucose iomerase) |
pgk | (Phosphoglycerate kinase) |
phoE | (Phosphoporine E) |
pyrG | (CTP synthase) |
rpoB | (β-subunit of RNA polymerase B) |
fusA | (Elongation factor G) |
Gene/primer | Sequence (5’-3’) | Annealing (Tm) | Size (bp) | Amplification Product (bp) |
---|---|---|---|---|
leuSKv-F | CGAACAGGTTATCGACGGCT | 63 °C | 594 | 968 |
leuSKv-R | CAAAGGTGTCGGTTTCACGC | |||
pgiKv-F | AAAGAGACCGATCTGGCAGG | 60 °C | 600 | 760 |
pgiKv-R | ACCAGATACCGATCAGCGCC | |||
pgkKv-F | TCGTGATGGATGCTTTCGGT | 63 °C | 594 | 444663 |
pgkKv-R | AGATTTTGTCAGCGATGCCG | |||
phoEKv-F | CTGTACGACGTGGAAGCCTG | 63 °C | 453 | 613 |
phoEKv-R | CCACGAAGGCGTTCATGTTT | |||
pyrGKv-F | CCGATCGCTATGGTCGCTG | 60 °C | 522 | 664 |
pyrGKv-R | CGGGACATCAGTTCCGGGT | |||
rpoBKv-F | GCCAGCTGTCCCAGTTTATG | 60 °C | 513 | 648 |
rpoBKv-R | GAACGGTACCGCCACGTTTA | |||
fusAKv-F | CGAAAACCAAAGCTGACCAGG | 62 °C | 561 | 782 |
fusAKv-R | CATGGTGTATGATGCACGACCT |
leuS (594 bp) |
GATCACTGGCCAGACACCGTAAAGACCATGCAGCGCAACTGGATCGGCCGTTCCGAAGGG GTGGAAATCTCCTTTGACGTCAACAACTACGCCGATAAGCTGACCGTCTACACCACCCGT CCGGACACCTTTATGGGCTGCACCTACCTGGCTGTCGCGGCGGGTCACCCGCTGGCGCAG CAGGCTGCAGCGAACAATCCGGCGCTGGCTGCCTTTATCGACGAATGCCGTAATACCAAA GTAGCCGAAGCCGACATGGCGACGATGGAGAAAAAAGGCGTCGATACCGGGTTTAAAGCC ATTCACCCGCTGACCGGCGAAGAAATTCCTGTCTGGGCGGCAAACTTCGTGCTGATGGAA TATGGCACCGGCGCGGTCATGGCCGTTCCGGGTCACGACCAGCGTGACTATGAGTTCGCC AGCAAGTACGGTCTGAACATCAAGCCGGTTATCCTCGCCGCTGACGGCAGCGAGCCGGAT CTCTCCGCGCAGGCGCTGACCGAGAAAGGCGTCCTGTTTAACTCCGGCGAGTTCAGCGGC CTCGATTATGAAGCCGGCTTCAACGCCATTGCCGACAAACTGGCAGCCATGGGC |
pgi (600 bp) |
GACCGTGCGGTACTGCACGTCGCGCTGCGCAACCGCAGCAATACGCCGATTGTGGTTGAT GGCAAAGATGTGATGCCGGAAGTGAACGCTGTGCTGGAGAAGATGAAAACCTTCTCAGAA GCGATTATCTCCGGTAGCTGGAAAGGCTATACCGGCAAACCGATCACCGACGTGGTTAAC ATTGGTATCGGCGGTTCCGACCTCGGTCCGTTCATGGTCACCGAAGCGCTGCGTCCGTAC AAAAACCACCTCAACATGCACTTTGTCTCCAACGTCGATGGCACCCACATCGCTGAAGTG CTGAAGAACGTCAACCCGGAAACGACCCTGTTCCTGGTGGCGTCCAAGACCTTCACCACT CAGGAAACCATGACCAACGCCCACAGCGCGCGCGACTGGTTCCTGGCGACCGCGGGCGAC GACAAACACGTGGCCAAACACTTCGCGGCGCTTTCTACCAACGCGAAAGCGGTTGGCGAG TTCGGCATCGACACCGCCAACATGTTTGAATTCTGGGACTGGGTTGGCGGCCGTTACTCC CTGTGGTCGGCGATTGGCCTGTCCATCATTCTCTCCGTGGGCTTCGACAACTTCGTTGAG |
pgk (444 bp) |
GCGTGCGCAGGCCCGCTGCTGGCCGCTGAACTGGACGCGCTGGGTAAAGCGCTGAAAGAG CCGGCTCGTCCGATGGTCGCTATCGTGGGTGGTTCTAAAGTGTCCACCAAACTGACCGTG CTGGATTCCCTGTCTAAAATCGCTGACCAGCTGATCGTCGGCGGCGGTATCGCCAACACC TTCGTTGCTGCCCAGGGCCACAACGTCGGTAAATCCCTGTACGAAGCAGACCTGGTTGAT GAAGCTAAGCGCCTGCTGAGCACCTGTGATATCCCGGTTCCGACGGACGTTCGCGTCGCG ACCGAGTTCTCCGAAACCGCAACGGCAACCCTGAAATCTGTTAACGACATCAAAGATGAC GAGCAGATTCTGGACCTTGGCGACGTTTCCGCACAGAAACTGGCCGACATCCTGAAAAAC GCCAAAACCATCCTGTGGAACGGC |
phoE (453 bp) |
GATTCCTCTGCCCAGACCGATAACTTTATGACCAAACGCGCCAGCGGCCTGGCGACCTAC CGCAATACCGATTTCTTCGGTCTGGTGGATGGTCTGGATATGACCCTGCAGTACCAGGGT AAAAACGAAGGCCGTGAAGCGAAGAAACAGAACGGCGACGGCGTTGGCACCTCATTAAGC TATGATTTCGGCGGCAGCGACTTCGCCGTCAGCGCGGCCTACACCAGCTCCGACCGTACC AACGATCAGAACCTGCTGGCCCGCGGCCAGGGTTCGAAAGCGGAAGCCTGGGCGACCGGC CTGAAATATGACGCCAACAATATCTACCTGGCGACCATGTATTCTGAGACCCGCAAAATG ACCCCGATCAGCGGCGGTTTTGCCAACAAAGCGCAGAACTTTGAAGCGGTGGCGCAGTAT CAGTTCGACTTCGGTCTGCGTCCGTCCCTCGGC |
pyrG (522 bp) |
ACGTCCTTGCGCATCGCACTGATTGGCCGTGAGTCAGACCACCGTCTGGTCTACCCCGCC ACGCTTGGCTCACTGGGTGATGCCGCGGCGTCGCTGGGGCTGAACCTGGAGGTCCATTTC TTCGCGCCGGTCAGTCTGTCCCCTGGGTTACACGACCTCCACGACGTCCAGGGCGTCGTG TTGCCAGGCGGTTCCTCGATGGCCGCCGTCAAGGGACAAATCCGCGTGGCGGAAGATACG CTTGCCCGCGGACAGCCCACGCTGGGGTTATGCCTGGGAATGCAGAGCATGATGACCGCA GTCGTGCGCCGACGTCCGGGTTGCGAATCAGCCATTCCCGCCGAAGTGGCTCCGGATGAG GCTCTGCACAGCTTTGTTCCCTTTGTTGATGGCCGTCATCGCTGCGGCGTATTCCCTTTT TCCTTCGGGTTGATCCCCGGTGATATCCGCGAAATGCACTACAACCATCGCTACTGCTTT AACACCGACTTATTACCGGCGCTGGATCGCAGCGGGGTCAGC |
rpoB (513 bp) |
ATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGCGCAGGCTTCGAAGTTCGAGAC GTACACCCGACGCACTACGGTCGCGTATGTCCAATCGAAACGCCTGAAGGTCCGAACATC GGTCTGATCAACTCCCTGTCCGTGTACGCACAGACTAACGAATACGGTTTCCTTGAGACC CCGTATCGTAAAGTGACCGACGGTGTGGTTACCGATGAAATTCACTACCTGTCTGCTATC GAAGAAGGCAACTACGTTATTGCTCAGGCGAACTCCAACCTGGATGAAAACGGCCACTTC GTAGAAGACCTGGTTACCTGCCGTAGCAAAGGCGAATCCAGCTTGTTCAGCCGCGACCAG GTTGACTACATGGACGTATCCACCCAGCAGGTGGTATCCGTCGGTGCGTCCCTGATCCCG TTCCTGGAGCACGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCG GTTCCGACTCTGCGCGCTGATAAGCCGCTGGTT |
fusA (561 bp) |
AACCAGACCATCATCGCCGGTATGGGTGAGCTGCACCTCGACATCATCGTTGACCGTATG AAGCGTGAATTCAACGTTGAAGCGAACGTCGGTAAACCTCAGGTTGCTTACCGTGAAGCG ATTCGCGCGAAAGTTACCGATATCGAAGGTAAACACGCCAAGCAGTCTGGTGGTCGTGGT CAGTACGGTCACGTTGTGATCGACATGTACCCGCTGGAGCCGGGCTCTAACCCGAAAGGT TACGAGTTCATCAACGACATCAAAGGTGGTGTAATTCCTGGCGAATACATCCCGGCCGTT GATAAAGGCATCCAGGAACAGCTGAAAGCTGGTCCGCTGGCAGGTTACCCGGTAGTTGAT ATGGGTATCCGTCTGCACTTCGGTTCTTACCACGACGTTGACTCCTCTGAGCTGGCGTTT AAACTGGCTGCGTCTATTGCCTTTAAAGAAGGCTTTAAGAAGGCAAAACCAGTTCTGCTT GAGCCGATCATGAAGGTTGAAGTAGAAACTCCGGAAGAGAACACTGGTGATGTTATCGGT GACTTGAGCCGTCGTCGCGGT |
ST | Origin | Sample | ESBL/Carba- penemase |
Country | Accession | Strain | leuS | pgi | pgk | phoE | pyrG | rpoB | fusA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | Human | Blood | SHV-2 | Mexico | CDMV00000000 | 801 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Blood | SHV-2a | Mexico | 25886267 | 805 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Blood | SHV-2 | Mexico | 25886267 | 806 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Blood | SHV-2a | Mexico | 25886267 | 807 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Blood | SHV-2a | Mexico | 25886267 | 808 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Blood | SHV-2a | Mexico | 25886267 | 809 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Blood | SHV-2a | Mexico | 25886267 | 811 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Blood | SHV-2a | Mexico | 25886267 | 812 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
1 | Human | Urine | Negative | USA | QIYN01000001.1 | WUSM_KV_09 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
2 | Human | Sputum | Negative | Mexico | CEGG00000000 | 8917 | 1 | 2 | 2 | 1 | 2 | 1 | 2 |
3 | Plant | Banana root | Negative | Mexico | CXPC00000000 | 6A2 | 1 | 3 | 3 | 2 | 3 | 1 | 3 |
3 | Human | Blood | Negative | Italy | UJZQ01000001.1 | EuSCAPE_IT012 | 1 | 3 | 3 | 2 | 3 | 1 | 3 |
3 | Human | Blood | Negative | Serbia | UKAM01000001.1 | EuSCAPE_RS065 | 1 | 3 | 3 | 2 | 3 | 1 | 3 |
4 | Human | Abscess | CTX-M-15 | Mexico | CXOZ00000000 | 06-268 | 1 | 1 | 4 | 2 | 4 | 2 | 2 |
5 | Human | Blood | Negative | Mexico | CXPB00000000 | 4880 | 1 | 4 | 5 | 3 | 1 | 1 | 4 |
6 | Plant | Sugar cane stem | Negative | Mexico | CXPA00000000 | T29A | 2 | 5 | 6 | 4 | 5 | 1 | 2 |
7 | Insect | Fungus matrix | Negative | Panama | CP001891.1 | At-22 | 3 | 1 | 7 | 1 | 6 | 3 | 4 |
8 | Plant | Maize stems | Negative | USA | CP000964.1 | 342 | 1 | 6 | 8 | 5 | 7 | 1 | 5 |
9 | Plant | Banana roots | Negative | China | CP009274 | DX120E | 1 | 6 | 9 | 1 | 8 | 1 | 2 |
10 | Human | Gut | Negative | Denmark | CBBA000000000 | CAG:634 | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
10 | Human | Blood | SHV-12 (LEN-type negative) | China | CP030173.1 | 13450 | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
10 | Human | Wound swab | Negative | Tanzania | OVDM01000001.1 | KCRI-198C | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
10 | Human | Sputum | Negative | Tanzania | OVDP01000001.1 | KCRI-201B | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
10 | Human | Respiratory | SHV-30 | USA | SRX2681986 | KPN1264 | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
10 | Human | Urine | Negative | USA | QIXS01000001.1 | WUSM_KV_30 | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
10 | Human | Urine | Negative | USA | QIXM01000001.1 | WUSM_KV_36 | 1 | 4 | 10 | 6 | 9 | 1 | 2 |
11 | plant | Banana root | Negative | China | CP010523 | DSM15968 | 4 | 7 | 5 | 1 | 10 | 1 | 4 |
11 | Plant | Banana root | Negative | Mexico | 15053318 | F2R9 (ATCC BAA-830) | 4 | 7 | 5 | 1 | 10 | 1 | 4 |
12 | Human | Faeces | negative | Braziil | JDWA00000000 | BZ19 | 5 | 8 | 11 | 1 | 11 | 1 | 4 |
13 | Insect | Nezara viridula (Cotton Pathogen Vector; southern green stink bug) | negative | USA | CP008700.1 | KP5-1 | 6 | 6 | 4 | 7 | 11 | 1 | 2 |
14 | Human | Pus | CTX-M-15/KPC-6 | Malaysia | JRTV00000000 | 223/14 | 7 | 3 | 6 | 8 | 12 | 4 | 3 |
15 | Plant | Bitter gourd | negative | Malaysia | JSWX00000000 | B1 | 8 | 4 | 12 | 9 | 1 | 1 | 2 |
16 | Plant | Chili | negative | Malaysia | JSXA00000000 | CH4 | 9 | 3 | 12 | 8 | 3 | 5 | 2 |
16 | Human | Urine | negative | USA | JMWB00000000 | BIDMC61 | 9 | 3 | 12 | 8 | 3 | 5 | 2 |
17 | Human | Respiratory | negative | USA | AYJK00000000 | MGH20 | 1 | 1 | 1 | 1 | 4 | 1 | 2 |
18 | missing | Urine | negative | USA | AYIX00000000 | MGH40 | 10 | 9 | 6 | 1 | 13 | 1 | 6 |
19 | missing | missing | negative | USA | AYIF00000000 | UCICRE10 | 1 | 4 | 1 | 1 | 11 | 1 | 2 |
20 | Human | Urine | negative | USA | JCML00000000 | UCI18 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | missing | negative | USA | LFAP00000000 | MGH114 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | Unknown | negative | Germany | UIDW01000001.1 | ID_2 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | Unknown | negative | Germany | UIDT01000001.1 | ID_5 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | Unknown | negative | Germany | UIDV01000001.1 | ID_6 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | Unknown | negative | Germany | UIDM01000001.1 | ID_8 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | Urine | negative | Belgium | UKAV01000001.1 | EuSCAPE_BE029 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | Unknown | negative | Germany | UIDI01000001.1 | ID_11 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
20 | Human | Urine | negative | USA | QIXC01000001.1 | WUSM_KV_46 | 1 | 10 | 2 | 10 | 14 | 1 | 2 |
21 | Human | Urine | negative | USA | JMZD00000000 | MGH68 | 11 | 5 | 5 | 11 | 11 | 1 | 2 |
22 | Human | Urine | negative | USA | JMZM00000000 | MGH80 | 11 | 3 | 6 | 12 | 11 | 6 | 4 |
23 | Human | missing | negative | USA | LFBA00000000 | BIDMC88 | 1 | 11 | 10 | 6 | 9 | 1 | 2 |
24 | Human | missing | negative | USA | LFBC00000000 | BIDMC90 | 12 | 12 | 10 | 1 | 15 | 1 | 4 |
25 | Human | missing | negative | USA | LFAD00000000 | MGH92 | 9 | 13 | 13 | 13 | 7 | 1 | 4 |
26 | Human | missing | negative | USA | ACXA00000000 | 1.1.55 | 9 | 10 | 13 | 13 | 7 | 1 | 4 |
27 | Human | missing | negative | USA | ASQN00000000 | KTE92 | 11 | 6 | 5 | 1 | 16 | 4 | 4 |
28 | Human | Blood | negative | Mexico | 15053318 | 1109 | 1 | 1 | 4 | 2 | 17 | 2 | 2 |
29 | Human | Catheter | negative | Mexico | 15053318 | 1171 | 1 | 4 | 3 | 14 | 18 | 1 | 3 |
30 | Human | Secretion | negative | Mexico | 25886267 | 9351 | 1 | 14 | 5 | 1 | 19 | 1 | 4 |
31 | Human | Biliary liquids | negative | Mexico | 25886267 | 9353 | 13 | 15 | 1 | 1 | 20 | 1 | 2 |
32 | Human | Abscess | negative | Mexico | 25886267 | 9925 | 14 | 16 | 14 | 15 | 21 | 7 | 2 |
32 | Human | Blood | negative | Mexico | 26571390 | 10239 | 14 | 16 | 14 | 15 | 21 | 7 | 2 |
32 | Human | Sputum | negative | USA | JVTE01000001 | 1335_KPNE | 14 | 16 | 14 | 15 | 21 | 7 | 2 |
32 | Human | Blood | negative | USA | SRX2682028 | KPN700 | 14 | 16 | 14 | 15 | 21 | 7 | 2 |
32 | Human | Other (CAPD) | negative | Portugal | UJZY01000001.1 | EuSCAPE_PT079 | 14 | 16 | 14 | 15 | 21 | 7 | 2 |
33 | Plant | Banana stem | negative | Mexico | 15053318 | VI | 15 | 6 | 15 | 1 | 22 | 1 | 2 |
34 | Plant | Rice roots | negative | Mexico | 15053318 | CFN2006 | 1 | 3 | 5 | 16 | 1 | 8 | 2 |
35 | Human | Vaginal secretion | negative | Mexico | 29692906 | 10447 | 16 | 1 | 5 | 1 | 1 | 1 | 6 |
36 | Human | missing | negative | Mexico | This work | 9271 | 1 | 4 | 16 | 2 | 23 | 9 | 2 |
37 | Human | missing | negative | Mexico | This work | 9274 | 17 | 17 | 1 | 1 | 24 | 1 | 5 |
37 | Human | Wound, drain right lower quadrant | negative | Mexico | QIYH01000001.1 | WUSM_KV_15 | 17 | 17 | 1 | 1 | 24 | 1 | 5 |
38 | Human | missing | negative | Mexico | This work | 11212 | 1 | 4 | 10 | 6 | 1 | 1 | 2 |
39 | Human | missing | negative | Mexico | This work | 11214 | 11 | 6 | 13 | 2 | 25 | 3 | 4 |
40 | Human | missing | negative | Mexico | This work | 11226 | 1 | 18 | 17 | 17 | 1 | 10 | 2 |
41 | Human | missing | negative | Mexico | This work | 11248 | 2 | 5 | 10 | 1 | 1 | 1 | 2 |
41 | Environmental | Soil | negative | Singapore | CP013985.1 | LMG23571 | 2 | 5 | 10 | 1 | 1 | 1 | 2 |
42 | Human | Sputum | negative | Mexico | This work | 11254 | 18 | 6 | 4 | 1 | 1 | 6 | 2 |
43 | Human | missing | negative | Mexico | This work | 11435 | 17 | 17 | 1 | 1 | 26 | 1 | 5 |
44 | Human | missing | negative | Mexico | This work | 11463 | 12 | 19 | 13 | 1 | 27 | 1 | 4 |
45 | Human | missing | negative | Mexico | This work | 11436 | 1 | 1 | 6 | 18 | 28 | 1 | 4 |
46 | Plant | Sugarcane rhizosphere soil | negative | Mexico | This work | KvMx3 | 2 | 5 | 18 | 19 | 1 | 1 | 2 |
47 | Plant | Sugarcane rhizosphere soil | negative | Mexico | This work | KvMx4 | 19 | 15 | 6 | 20 | 22 | 1 | 6 |
48 | Plant | Maize rhizosphere soil | negative | Mexico | This work | KvMx18 | 11 | 10 | 19 | 1 | 4 | 1 | 2 |
49 | Human | Sputum | negative | USA | JVDU01000001.1 | 521_SSON | 1 | 20 | 6 | 21 | 1 | 7 | 2 |
49 | Human | Bronchoalveolar Lavage | negative | USA | JVDR01000001.1 | 524_SBOY | 1 | 20 | 6 | 21 | 1 | 7 | 2 |
42 | Human | Sputum | negative | USA | JUYL01000001.1 | 653_KVAR | 1 | 20 | 6 | 21 | 1 | 7 | 2 |
50 | Human | Fluid | negative | USA | JUXS01000001.1 | 671_KVAR | 1 | 3 | 6 | 22 | 3 | 8 | 2 |
51 | Human | Tracheal Aspirate | negative | USA | JUTF01000001.1 | 780_KPNE | 1 | 20 | 1 | 23 | 29 | 9 | 4 |
51 | Human | Tracheal Aspirate | negative | USA | JURI01000001.1 | 833_KPNE | 1 | 20 | 1 | 23 | 29 | 9 | 4 |
51 | Human | Tracheal Aspirate | negative | USA | JURH01000001.1 | 834_KPNE | 1 | 20 | 1 | 23 | 29 | 9 | 4 |
51 | Human | Tracheal Aspirate | negative | USA | JURG01000001.1 | 835_KPNE | 1 | 20 | 1 | 23 | 29 | 9 | 4 |
51 | Human | Tracheal Aspirate | negative | USA | JURF01000001.1 | 836_KPNE | 1 | 20 | 1 | 23 | 29 | 9 | 4 |
51 | Human | Tracheal Aspirate | negative | USA | JURE01000001.1 | 837_KPNE | 1 | 20 | 1 | 23 | 29 | 9 | 4 |
51 | Human | Urine catheter | negative | USA | QIYM01000001.1 | WUSM_KV_10 | 1 | 20 | 1 | 23 | 29 | 9 | 4 |
52 | Human | Urine, Catheterized | negative | USA | JUSW01000001.1 | 789_KVAR | 1 | 4 | 3 | 24 | 11 | 1 | 2 |
53 | Human | Body fluid | KPC-2 | USA | PTGT01000001.1 | 1565/2503 | 1 | 21 | 1 | 25 | 30 | 11 | 4 |
54 | Human | Unknown | negative | Vietnam | ERR025463 | 1892m | 1 | 5 | 5 | 1 | 1 | 1 | 2 |
54 | Human | missing | negative | USA | NGSP01000001.1 | BIDMC118 | 1 | 5 | 5 | 1 | 1 | 1 | 2 |
55 | Human | missing | negative | Mexico | This work | 11446 | 20 | 22 | 20 | 26 | 31 | 12 | 7 |
56 | Human | Unknown | negative | Australia | ERS005747 | AJ026 | 21 | 18 | 3 | 2 | 1 | 13 | 2 |
56 | Human | Unknown | negative | Australia | ERS005771 | AJ182 | 21 | 18 | 3 | 2 | 1 | 13 | 2 |
56 | Human | Trach asp | negative | USA | QIYS01000001.1 | WUSM_KV_04 | 21 | 18 | 3 | 2 | 1 | 13 | 2 |
56 | Human | Urine | negative | USA | QIYF01000001.1 | WUSM_KV_17 | 21 | 18 | 3 | 2 | 1 | 13 | 2 |
56 | Human | Urine | negative | USA | QIXD01000001.1 | WUSM_KV_45 | 21 | 18 | 3 | 2 | 1 | 13 | 2 |
57 | Human | Unknown | negative | Australia | ERS005754 | AJ135 | 22 | 6 | 6 | 27 | 1 | 1 | 8 |
57 | Human | Blood | CTX-M-15/OXA-1 | Netherlands | JXJH01000001.1 | KP-21F | 22 | 6 | 6 | 27 | 1 | 1 | 8 |
58 | Human | Unknown | negative | Australia | ERS005778 | AJ292 | 6 | 4 | 1 | 28 | 32 | 14 | 2 |
59 | missing | missing | negative | USA | MPCI01000001.1 | AR_0016 | 23 | 19 | 5 | 29 | 2 | 1 | 4 |
59 | Human | Urine | negative | USA | QIXW01000001.1 | WUSM_KV_26 | 23 | 19 | 5 | 29 | 2 | 1 | 4 |
60 | Human | Blood | CTX-M-15 | Bangladesh | QUAA01000001.1 | BD.DM.32 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15 | Bangladesh | QTZQ01000001.1 | BD.DM.33 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15/NDM-1 | Bangladesh | QTZR01000001.1 | BD.DM.97 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15/NDM-1 | Bangladesh | QTZS01000001.1 | BD.DM.115 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15/NDM-1 | Bangladesh | PJOO01000001.1 | BD.DM.165 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15/NDM-1 | Bangladesh | QTZT01000001.1 | BD.DM.166 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15/NDM-1 | Bangladesh | QTZU01000001.1 | BD.DM.167 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15 | Bangladesh | QTZV01000001.1 | BD.DM.169 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15 | Bangladesh | QTZW01000001.1 | BD.DM.322 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15 | Bangladesh | QTZX01000001.1 | BD.DM.323 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
60 | Human | Blood | CTX-M-15 | Bangladesh | QTZY01000001.1 | BD.DM.395 | 11 | 6 | 5 | 30 | 16 | 4 | 4 |
61 | Human | missing | KPC-2 | USA | NGSO01000001.1 | BIDMC117 | 1 | 9 | 6 | 1 | 13 | 1 | 6 |
61 | Human | Urine | negative | USA | QIXP01000001.1 | WUSM_KV_33 | 1 | 9 | 6 | 1 | 13 | 1 | 6 |
62 | Plant | Roots of tall fescue | negative | China | LOAR00000000 | D5A | 10 | 9 | 6 | 1 | 32 | 1 | 6 |
62 | Human | Unknown | negative | Germany | UIDS01000001.1 | ID_24 | 10 | 9 | 6 | 1 | 32 | 1 | 6 |
63 | Plant | Roots Maize | negative | China | NZ_CP016344.1 | E57-7 | 9 | 3 | 12 | 31 | 3 | 5 | 2 |
64 | Environmental | river water | NDM-9 | South Korea | NZ_CP017284.1 | GJ1 | 1 | 3 | 6 | 8 | 11 | 1 | 9 |
64 | Environmental | river water | NDM-9 | South Korea | NZ_CP017849.1 | GJ2 | 1 | 3 | 6 | 8 | 11 | 1 | 9 |
64 | Environmental | river water | CTX-M-65/NDM-9 | South Korea | NZ_CP017289.1 | GJ3 | 1 | 3 | 6 | 8 | 11 | 1 | 9 |
65 | Human | Unknown | CTX-M-148 | China | MOSU00000000 | H39 | 24 | 3 | 1 | 32 | 33 | 15 | 4 |
65 | Human | Pulmonary | CTX-M-24 (two copies) | China | CP018307 | X39 | 24 | 3 | 1 | 32 | 33 | 15 | 4 |
66 | Human | Unknown | negative | Germany | UIDY01000001.1 | ID_16 | 13 | 23 | 5 | 33 | 19 | 1 | 10 |
66 | Human | Unknown | negative | Germany | UIDU01000001.1 | ID_18 | 13 | 23 | 5 | 33 | 19 | 1 | 10 |
66 | Human | Unknown | negative | Germany | UIEF01000001.1 | ID_19 | 13 | 23 | 5 | 33 | 19 | 1 | 10 |
67 | Human | Unknown | negative | Germany | UIFG01000001.1 | ID_43 | 13 | 23 | 5 | 34 | 19 | 1 | 10 |
68 | Human | Unknown | negative | Germany | UIFD01000001.1 | ID_49 | 1 | 18 | 6 | 1 | 34 | 13 | 2 |
68 | Human | Blood | negative | Croatia | UKAN01000001.1 | EuSCAPE_HR085 | 1 | 18 | 6 | 1 | 34 | 13 | 2 |
69 | Human | Blood | DHA-1, SHV-12, CTX-M-14, KPC-2 | Bangladesh | NPGY01000001.1 | K2631 | 25 | 21 | 3 | 35 | 35 | 1 | 2 |
70 | Human | Wound swab | negative | Tanzania | OVDF01000001.1 | KCRI-152E | 26 | 10 | 1 | 36 | 1 | 13 | 2 |
71 | Human | Catheter | KPC-2 | Colombia | MSZI01000001.1 | KP007 | 9 | 4 | 6 | 24 | 1 | 1 | 2 |
72 | Human | Urine | SHV-12 | USA | SRX2681305 | KPN325 | 19 | 5 | 5 | 6 | 10 | 1 | 2 |
73 | Human | Blood | SHV-12 | USA | SRX2680563 | KPN458 | 11 | 9 | 6 | 20 | 1 | 13 | 2 |
73 | Human | Urine | negative | USA | QIXA01000001.1 | WUSM_KV_48 | 11 | 9 | 6 | 20 | 1 | 13 | 2 |
74 | Human | Urine | CTX-M-15 | USA | SRX2681541 | KPN807 | 27 | 4 | 3 | 1 | 35 | 1 | 2 |
75 | Human | Respiratory | KPC-2 | USA | SRX2681803 | KPN1401 | 1 | 1 | 15 | 1 | 1 | 11 | 4 |
75 | Human | Respiratory | TEM-69/KPC-2 | USA | SRX2681790 | KPN1415 | 1 | 1 | 15 | 1 | 1 | 11 | 4 |
76 | Human | Urine | CTX-M-15/NDM-1 | USA | SRX2681713 | KPN1481 | 28 | 24 | 5 | 37 | 36 | 1 | 2 |
77 | Human | Wound | SHV-12 | USA | SRX2681646 | KPN1556 | 11 | 1 | 3 | 1 | 11 | 1 | 2 |
77 | Human | Urine | negative | USA | QIWX01000001.1 | WUSM_KV_51 | 11 | 1 | 3 | 1 | 11 | 1 | 2 |
78 | Human | Urine | SHV-12/SHV-66 | USA | SRX2681570 | KPN1751 | 1 | 6 | 10 | 3 | 37 | 1 | 4 |
78 | Human | Urine | negative | Belgium | UKAP01000001.1 | EuSCAPE_BE032 | 1 | 6 | 10 | 3 | 37 | 1 | 4 |
79 | Human | Urine | negative | India | LZGB01000001.1 | KV093 | 15 | 6 | 1 | 1 | 38 | 14 | 4 |
80 | Plant/Fungus | Mycorrhiza of Pisolithus tinctorius | negative | China | LQMR01000001.1 | KV321 | 29 | 4 | 6 | 1 | 1 | 14 | 4 |
81 | Human | Catheter | negative | Mexico | This work | 9635 | 2 | 6 | 12 | 38 | 39 | 16 | 4 |
82 | Plant | Root of a sugarcane plant | negative | Mexico | FLLH01000001 | KvMx2 | 30 | 25 | 21 | 39 | 40 | 17 | 4 |
83 | Human | Faeces | negative | China | NLDD01000001 | L18 | 31 | 24 | 22 | 40 | 41 | 1 | 11 |
84 | Environmental | Industrial effluent | negative | Pakistan | MSCS01000001 | MB351 | 11 | 26 | 2 | 41 | 1 | 1 | 6 |
85 | Animal | Bovine - Mastitis | negative | Canada | LFYK01000000 | NL58 | 1 | 10 | 14 | 42 | 2 | 13 | 6 |
85 | Animal | Bovine - Mastitis | negative | Canada | LGAW01000000 | NL49 | 1 | 10 | 14 | 42 | 2 | 13 | 6 |
86 | Animal | Bovine - Intestinal | negative | USA | ERS011908 | QMP_B2-288 | 11 | 27 | 5 | 41 | 1 | 1 | 6 |
86 | Human | Urine | negative | Greece | UKAQ01000001.1 | EuSCAPE_GR014 | 11 | 27 | 5 | 41 | 1 | 1 | 6 |
87 | Animal | Bovine - Intestinal | negative | USA | ERS011920 | QMP_B2-340 | 13 | 28 | 3 | 9 | 1 | 1 | 2 |
87 | Animal | Bovine - Intestinal | negative | USA | ERS011926 | QMP_B2-483 | 13 | 28 | 3 | 9 | 1 | 1 | 2 |
88 | Animal | Bovine - Intestinal | negative | USA | ERS011925 | QMP_B2-481 | 2 | 1 | 3 | 38 | 4 | 18 | 6 |
89 | Animal | Bovine - Intestinal | Negative (LEN-type negative) | USA | ERS011933 | QMP_M1-043 | 1 | 17 | 1 | 25 | 42 | 1 | 4 |
90 | Animal | Unknown | negative | USA | ERS011961 | QMP_M1-428 | 32 | 29 | 3 | 24 | 35 | 19 | 4 |
91 | Animal | Urine | Negative (LEN-type negative) | USA | ERS011977 | QMP_M1-893 | 33 | 6 | 1 | 11 | 43 | 1 | 4 |
92 | Human | missing | CTX-M-15/KPC-2 | China | PWAV01000001.1 | SCKV020062 | 1 | 6 | 23 | 43 | 1 | 1 | 4 |
92 | Human | missing | CTX-M-15/KPC-2 | China | PWAU01000001.1 | SCKV020067 | 1 | 6 | 23 | 43 | 1 | 1 | 4 |
92 | Human | missing | CTX-M-15/KPC-2 | China | PWAT01000001.1 | SCKV020069 | 1 | 6 | 23 | 43 | 1 | 1 | 4 |
92 | Human | Unknown | negative | China | NZ_CP028555.1 | WCHKP19 | 1 | 6 | 23 | 43 | 1 | 1 | 4 |
93 | Human | missing | NDM-5 | China | NWEW01000001.1 | SCKV020148 | 1 | 3 | 3 | 2 | 3 | 20 | 3 |
94 | Human | missing | CTX-M-15 | South Africa | NXJG01000001.1 | ST-1791-KOO1 | 34 | 6 | 6 | 1 | 35 | 1 | 4 |
95 | Environmental | GM-anode biofilm | negative | missing | DBMQ01000001.1 | UBA694 | 18 | 24 | 5 | 1 | 1 | 1 | 4 |
96 | Environmental | Metal/Plastic | negative | USA | DFSA01000001.1 | UBA3449 | 11 | 4 | 10 | 6 | 44 | 8 | 2 |
97 | Environmental | Metal/Plastic | negative | USA | DGAC01000001.1 | UBA4040 | 13 | 24 | 6 | 30 | 1 | 1 | 2 |
98 | Human | Unknown | negative | China | NZ_CP027064.2 | WCHKV030666 | 28 | 30 | 5 | 37 | 1 | 1 | 2 |
99 | Human | Unknown | negative | China | NWEJ01000001.1 | WCHKV030937 | 35 | 4 | 6 | 1 | 1 | 1 | 2 |
100 | Human | Urine | negative | USA | QIYV01000001.1 | WUSM_KV_01 | 6 | 24 | 5 | 1 | 1 | 1 | 4 |
101 | Human | Unknown | negative | USA | QIYV01000001.1 | WUSM_KV_02 | 2 | 5 | 6 | 3 | 5 | 1 | 2 |
102 | Human | Aspirate, left breast | negative | USA | QIYT01000001.1 | WUSM_KV_03 | 23 | 19 | 2 | 8 | 45 | 1 | 2 |
103 | Human | Sputum | negative | USA | QIYQ01000001.1 | WUSM_KV_06 | 36 | 6 | 10 | 3 | 37 | 1 | 4 |
103 | Human | Urine | negative | USA | QIXK01000001.1 | WUSM_KV_38 | 36 | 6 | 10 | 3 | 37 | 1 | 4 |
103 | Human | Wound | negative | USA | QIWZ01000001.1 | WUSM_KV_49 | 36 | 6 | 10 | 3 | 37 | 1 | 4 |
103 | Human | Blood | negative | Germany | UJZE01000001.1 | EuSCAPE_DE052 | 36 | 6 | 10 | 3 | 37 | 1 | 4 |
104 | Human | Urine | negative | USA | QIYP01000001.1 | WUSM_KV_07 | 2 | 27 | 6 | 2 | 1 | 13 | 6 |
105 | Human | Drainage, left groin | negative | USA | QIYO01000001.1 | WUSM_KV_08 | 2 | 6 | 1 | 25 | 32 | 11 | 2 |
105 | Human | Tibia | negative | USA | QIYL01000001.1 | WUSM_KV_11 | 2 | 6 | 1 | 25 | 32 | 11 | 2 |
105 | Human | Urine | negative | Italy | UJZU01000001.1 | EuSCAPE_IT360 | 2 | 6 | 1 | 25 | 32 | 11 | 2 |
106 | Human | Urine | negative | USA | QIYK01000001.1 | WUSM_KV_12 | 5 | 31 | 5 | 44 | 46 | 13 | 2 |
107 | Human | Urine | negative | USA | QIYJ01000001.1 | WUSM_KV_13 | 37 | 32 | 1 | 3 | 37 | 7 | 4 |
108 | Human | Blood | negative | USA | QIYI01000001.1 | WUSM_KV_14 | 38 | 33 | 24 | 45 | 47 | 1 | 6 |
108 | Human | Urine | negative | USA | QIYD01000001.1 | WUSM_KV_19 | 38 | 33 | 24 | 45 | 47 | 1 | 6 |
109 | Human | Blood | negative | USA | QIYG01000001.1 | WUSM_KV_16 | 39 | 1 | 1 | 1 | 1 | 1 | 1 |
110 | Human | Urine | negative | USA | QIYE01000001.1 | WUSM_KV_18 | 11 | 1 | 6 | 46 | 48 | 2 | 4 |
111 | Human | Urine | negative | USA | QIYB01000001.1 | WUSM_KV_21 | 40 | 27 | 6 | 3 | 1 | 13 | 6 |
112 | Human | Urine | negative | USA | QIYA01000001.1 | WUSM_KV_22 | 41 | 5 | 6 | 8 | 4 | 2 | 2 |
112 | Human | Urine | negative | USA | QIXZ01000001.1 | WUSM_KV_23 | 41 | 5 | 6 | 8 | 4 | 2 | 2 |
112 | Human | Blood | negative | USA | QIXY01000001.1 | WUSM_KV_24 | 41 | 5 | 6 | 8 | 4 | 2 | 2 |
113 | Human | Blood | negative | USA | QIXX01000001.1 | WUSM_KV_25 | 14 | 1 | 6 | 1 | 36 | 1 | 2 |
113 | Human | Urine | negative | USA | QIXN01000001.1 | WUSM_KV_35 | 14 | 1 | 6 | 1 | 36 | 1 | 2 |
114 | Human | Urine | negative | USA | QIXV01000001.1 | WUSM_KV_27 | 1 | 28 | 6 | 43 | 49 | 13 | 2 |
115 | Human | Urine | negative | USA | QIXU01000001.1 | WUSM_KV_28 | 11 | 23 | 6 | 1 | 35 | 1 | 10 |
116 | Human | Urine | negative | USA | QIXT01000001.1 | WUSM_KV_29 | 2 | 4 | 6 | 24 | 4 | 21 | 2 |
116 | Human | Urine | negative | USA | QIXQ01000001.1 | WUSM_KV_32 | 2 | 4 | 6 | 24 | 4 | 21 | 2 |
117 | Human | Urine | negative | USA | QIXR01000001.1 | WUSM_KV_31 | 42 | 1 | 3 | 47 | 1 | 7 | 12 |
118 | Human | Urine | negative | USA | QIXL01000001.1 | WUSM_KV_37 | 41 | 5 | 6 | 8 | 35 | 2 | 2 |
119 | Human | Urine | negative | USA | QIXJ01000001.1 | WUSM_KV_39 | 1 | 18 | 12 | 1 | 34 | 12 | 2 |
120 | Human | Urine | negative | USA | QIXH01000001.1 | WUSM_KV_41 | 35 | 27 | 6 | 3 | 1 | 13 | 6 |
121 | Human | Urine | negative | USA | QIXE01000001.1 | WUSM_KV_44 | 38 | 34 | 1 | 1 | 35 | 1 | 10 |
122 | Human | Bronchial wash | negative | USA | QIWY01000001.1 | WUSM_KV_50 | 5 | 8 | 7 | 40 | 11 | 11 | 4 |
123 | Human | Urine | negative | USA | QIWW01000001.1 | WUSM_KV_52 | 1 | 3 | 12 | 1 | 1 | 10 | 2 |
124 | Human | Urine | negative | USA | QIWV01000001.1 | WUSM_KV_53 | 9 | 4 | 5 | 1 | 32 | 13 | 4 |
125 | Human | Blood | CTX-M-14/KPC-2 | USA | QIWU01000001.1 | WUSM_KV_54 | 43 | 1 | 3 | 38 | 4 | 1 | 4 |
125 | Human | Urine | negative | Austria | UJZA01000001.1 | EuSCAPE_AT005 | 43 | 1 | 3 | 38 | 4 | 1 | 4 |
126 | Human | BAL | negative | USA | QIWT01000001.1 | WUSM_KV_55 | 1 | 19 | 1 | 38 | 1 | 1 | 4 |
127 | Human | UR CVS | negative | USA | QIVS01000001.1 | WUSM_KV_82 | 1 | 10 | 6 | 45 | 22 | 7 | 6 |
128 | Human | Blood | negative | USA | QIVD01000001.1 | WUSM_KV_97 | 1 | 35 | 1 | 48 | 35 | 1 | 2 |
129 | Human | Blood | negative | USA | QIUP01000001.1 | WUSM_KV_111 | 13 | 6 | 6 | 41 | 50 | 2 | 4 |
130 | Human | missing | SHV-40/KPC-2 | USA | PGIO01000001.1 | YD626-2 | 1 | 4 | 5 | 6 | 9 | 1 | 2 |
131 | Plant | Potato | negative | Japan | AP014950.1 | YH43 | 44 | 22 | 20 | 49 | 51 | 22 | 7 |
132 | Human | Puncture Fluids | negative | Belgium | UKAT01000001.1 | EuSCAPE_BE101 | 28 | 30 | 3 | 37 | 1 | 1 | 2 |
133 | Human | Other (gall bladder) | negative | Germany | UJZJ01000001.1 | EuSCAPE_DE018 | 13 | 15 | 1 | 1 | 22 | 1 | 2 |
134 | Human | Wound Secretion | negative | Germany | UJZI01000001.1 | EuSCAPE_DE056 | 2 | 4 | 3 | 38 | 52 | 18 | 4 |
135 | Human | Wound Secretion | negative | Germany | UJZK01000001.1 | EuSCAPE_DE060 | 11 | 1 | 5 | 41 | 53 | 1 | 6 |
136 | Human | Blood | KPC-2 | Germany | UJZM01000001.1 | EuSCAPE_DE073 | 11 | 36 | 6 | 1 | 1 | 6 | 2 |
137 | Human | Lower Respiratory Tract Secrection | negative | Germany | UJZL01000001.1 | EuSCAPE_DE087 | 9 | 24 | 16 | 50 | 1 | 13 | 2 |
138 | Human | Blood | negative | Denmark | UJZZ01000001.1 | EuSCAPE_DK012 | 45 | 37 | 25 | 8 | 11 | 23 | 13 |
139 | Human | Wound Secretion | negative | Estonia | UJZB01000001.1 | EuSCAPE_EE016 | 1 | 6 | 18 | 29 | 1 | 7 | 4 |
140 | Human | Puncture Fluids | SHV-1 (not ESBL) | Spain | UJZX01000001.1 | EuSCAPE_ES230 | 11 | 27 | 2 | 51 | 53 | 4 | 2 |
141 | Human | Blood | negative | Francia | UJZD01000001.1 | EuSCAPE_FR080 | 1 | 4 | 5 | 1 | 15 | 1 | 14 |
142 | Human | Lower Respiratory Tract Secrection | negative | Croatia | UKAG01000001.1 | EuSCAPE_HR006 | 9 | 17 | 13 | 3 | 7 | 1 | 4 |
143 | Human | Lower Respiratory Tract Secrection | negative | Croatia | UKAR01000001.1 | EuSCAPE_HR033 | 11 | 24 | 18 | 52 | 54 | 3 | 2 |
144 | Human | Blood | negative | Hungary | UJZW01000001.1 | EuSCAPE_HU040 | 1 | 3 | 6 | 8 | 11 | 1 | 2 |
144 | Human | Urine | negative | Portugal | UKAH01000001.1 | EuSCAPE_PT061 | 1 | 3 | 6 | 8 | 11 | 1 | 2 |
145 | Human | Blood | negative | Ireland | UKAL01000001.1 | EuSCAPE_IE014 | 1 | 10 | 6 | 25 | 11 | 13 | 6 |
146 | Human | Blood | negative | Ireland | UKAZ01000001.1 | EuSCAPE_IE021 | 1 | 4 | 5 | 2 | 9 | 1 | 2 |
146 | Human | Blood | negative | United Kingdom | UKAE01000001.1 | EuSCAPE_UK107 | 1 | 4 | 5 | 2 | 9 | 1 | 2 |
147 | Human | Blood | negative | Israel | UJZN01000001.1 | EuSCAPE_IL071 | 11 | 28 | 6 | 43 | 55 | 13 | 2 |
148 | Human | Urine | negative | Italy | UJZV01000001.1 | EuSCAPE_IT091 | 28 | 3 | 5 | 53 | 1 | 1 | 2 |
149 | Human | Lower Respiratory Tract Secrection | negative | Italy | UJZP01000001.1 | EuSCAPE_IT159 | 5 | 38 | 5 | 44 | 46 | 13 | 2 |
150 | Human | Urine | negative | Italy | UJZR01000001.1 | EuSCAPE_IT191 | 1 | 17 | 14 | 10 | 39 | 1 | 4 |
151 | Human | Blood | negative | Italy | UJZO01000001.1 | EuSCAPE_IT251 | 1 | 18 | 12 | 1 | 56 | 1 | 2 |
152 | Human | Blood | negative | Italy | UKAC01000001.1 | EuSCAPE_IT309 | 2 | 39 | 1 | 12 | 1 | 2 | 4 |
153 | Human | Urine | negative | Italy | UJZT01000001.1 | EuSCAPE_IT344 | 1 | 18 | 12 | 1 | 1 | 10 | 2 |
154 | Human | Urine | negative | Italy | UJZS01000001.1 | EuSCAPE_IT389 | 1 | 3 | 6 | 12 | 3 | 24 | 15 |
155 | Human | Urine | negative | Norway | UJZH01000001.1 | EuSCAPE_NO020 | 9 | 40 | 1 | 54 | 57 | 1 | 5 |
156 | Human | Urine | negative | Poland | UJZC01000001.1 | EuSCAPE_PL033 | 46 | 28 | 16 | 38 | 58 | 16 | 4 |
157 | Human | Urine | negative | Portugal | UKAA01000001.1 | EuSCAPE_PT077 | 47 | 41 | 1 | 13 | 13 | 1 | 5 |
158 | Human | Puncture Fluids | SHV-1 (not ESBL) | Romania | UKAJ01000001.1 | EuSCAPE_RO063 | 11 | 5 | 12 | 1 | 59 | 4 | 2 |
159 | Human | Pus | negative | Romania | UKAK01000001.1 | EuSCAPE_RO090 | 2 | 4 | 3 | 38 | 4 | 18 | 4 |
160 | Human | Blood | SHV-12, OXA-9 | Serbia | UKAO01000001.1 | EuSCAPE_RS096 | 1 | 18 | 3 | 1 | 1 | 13 | 2 |
161 | Human | Puncture Fluids | OXA-1 (not ESBL) | Slovenia | UKAB01000001.1 | EuSCAPE_SI005 | 31 | 42 | 26 | 20 | 1 | 25 | 4 |
162 | Human | Urine | negative | Slovenia | UKAD01000001.1 | EuSCAPE_SI024 | 38 | 24 | 6 | 1 | 35 | 1 | 10 |
163 | Human | Urine | negative | Turkey | UKAS01000001.1 | EuSCAPE_TR218 | 13 | 1 | 6 | 1 | 1 | 13 | 4 |
164 | Human | Urine | CTX-M-3 | Turkey | UKAU01000001.1 | EuSCAPE_TR259 | 1 | 6 | 5 | 1 | 32 | 1 | 2 |
165 | Human | Urine | negative | United Kingdom | UKAF01000001.1 | EuSCAPE_UK089 | 16 | 1 | 5 | 41 | 34 | 1 | 6 |
166 | Human | Urine | negative | United Kingdom | UKAI01000001.1 | EuSCAPE_UK124 | 48 | 4 | 3 | 1 | 60 | 4 | 2 |
167 | Animal (migratory bird) | unknown | unknown | Brazil | in process | M50 | 1 | 36 | 12 | 1 | 1 | 1 | 2 |
168 | Human | Catheter | unknown | Brazil | GCA_012274355.1 | Kv57 | 19 | 24 | 1 | 1 | 1 | 1 | 2 |
169 | Human | unknown | negative | Brazil | in process | 18L | 49 | 4 | 6 | 1 | 36 | 1 | 2 |
170 | Human | Urine | negative | Brazil | GCA_012274425.1 | Kv15 | 50 | 3 | 5 | 20 | 35 | 4 | 2 |
171 | Human | Blood | negative | Brazil | GCA_012274365.1 | Kv35 | 11 | 43 | 6 | 1 | 35 | 1 | 2 |
172 | Human | Urine | unknown | Brazil | GCA_012274385.1 | Kv97 | 18 | 20 | 1 | 55 | 11 | 1 | 4 |
172 | Human | Blood | unknown | Brazil | GCA_012274345.1 | Kv104 | 18 | 20 | 1 | 55 | 11 | 1 | 4 |
173 | Human | Catheter | SHV-12 | Chile | VSSZ00000000.1 | UCO-495 | 10 | 9 | 6 | 1 | 11 | 1 | 2 |
174 | Animal | Liver | Negative | China | CP047360 | AHKv-S01 | 19 | 6 | 5 | 1 | 5 | 7 | 4 |
175 | River | Water | blaCTX-M-15, blaTEM-1B, blaLEN16 | Brazil | Under submission (In process) | SQ91 | 51 | 6 | 27 | 56 | 61 | 1 | 4 |